Genome ID:GCA_041514335.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 26 | 28 | 38.21 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IJHPJAAA_1 | 44999 | 45838 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| IJHPJAAA_1 | 1142393 | 1143262 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| IJHPJAAA_1 | 1141800 | 1142393 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| IJHPJAAA_1 | 1326315 | 1327124 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| IJHPJAAA_1 | 1141800 | 1142393 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| IJHPJAAA_1 | 1141800 | 1142393 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| IJHPJAAA_1 | 1322254 | 1324038 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226325 |
| IJHPJAAA_1 | 1327108 | 1328064 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.48 | 100.00 | WP_011226328 |
| IJHPJAAA_1 | 901882 | 903540 | fbp54 | 0.0 | FBPs | Adherence | 99.46 | 100.00 | WP_011227179 |
| IJHPJAAA_1 | 1325110 | 1326315 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.25 | 100.00 | WP_011226326 |
| IJHPJAAA_1 | 1178587 | 1179348 | srtA | 0.0 | Sortase A | Exoenzyme | 99.08 | 100.00 | - |
| IJHPJAAA_1 | 1324035 | 1325090 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 98.96 | 100.00 | WP_002948022 |
| IJHPJAAA_1 | 1330905 | 1331867 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 98.75 | 95.25 | WP_011226330 |
| IJHPJAAA_1 | 1013610 | 1014341 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011681176 |
| IJHPJAAA_1 | 1334244 | 1335095 | rfbD | 0.0 | Capsule | Immune modulation | 98.59 | 100.00 | WP_014621820 |
| IJHPJAAA_1 | 1328061 | 1329209 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 98.52 | 100.00 | WP_041828290 |
| IJHPJAAA_1 | 1013610 | 1014341 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011226048 |
| IJHPJAAA_1 | 1014342 | 1015796 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 98.35 | 100.00 | WP_041827043 |
| IJHPJAAA_1 | 1002182 | 1003597 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.31 | 100.00 | WP_011681165 |
| IJHPJAAA_1 | 1084157 | 1084945 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.23 | 99.75 | - |
| IJHPJAAA_1 | 1013610 | 1014341 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227248 |
| IJHPJAAA_1 | 1014342 | 1015796 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.01 | 100.00 | WP_011226049 |
| IJHPJAAA_1 | 1012159 | 1012899 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.84 | 100.00 | WP_011226046 |
| IJHPJAAA_1 | 1012909 | 1013601 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 97.83 | 100.00 | WP_011227247 |
| IJHPJAAA_1 | 1012909 | 1013601 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 97.83 | 100.00 | WP_011226047 |
| IJHPJAAA_1 | 1331870 | 1333141 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.72 | 99.76 | WP_011226331 |
| IJHPJAAA_1 | 1012159 | 1012899 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.71 | 100.00 | WP_011681174 |
| IJHPJAAA_1 | 1012164 | 1012899 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.42 | 98.13 | WP_011227246 |
| IJHPJAAA_1 | 1014342 | 1015796 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.12 | 99.79 | WP_011681177 |
| IJHPJAAA_1 | 1010735 | 1012101 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 95.25 | 99.93 | WP_011226045 |
| IJHPJAAA_1 | 1010737 | 1012101 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 93.26 | 99.78 | WP_011681173 |
| IJHPJAAA_1 | 1012909 | 1013601 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 91.20 | 100.00 | WP_011681175 |
| IJHPJAAA_1 | 634786 | 636089 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| IJHPJAAA_1 | 1618587 | 1619597 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.54 | 99.41 | WP_002986042 |
| IJHPJAAA_1 | 150836 | 152119 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| IJHPJAAA_1 | 1140325 | 1141371 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| IJHPJAAA_1 | 999814 | 1000400 | SPD_RS01775 | 1.09e-141 | Capsule | Immune modulation | 82.48 | 96.70 | WP_001819836 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IJHPJAAA_1 | 1182035 | 1183018 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| IJHPJAAA_1 | 746008 | 747081 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| IJHPJAAA_1 | 549675 | 550643 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| IJHPJAAA_1 | 1495403 | 1497706 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| IJHPJAAA_1 | 777363 | 779609 | metE | 0.0 | methionine biosynthesis enzymes | 91.86 | 100.00 | AAK74738 |
| IJHPJAAA_1 | 65759 | 66757 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| IJHPJAAA_1 | 28515 | 29486 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| IJHPJAAA_1 | 1379124 | 1377973 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| IJHPJAAA_1 | 1351484 | 1349496 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| IJHPJAAA_1 | 1165836 | 1164106 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| IJHPJAAA_1 | 1814830 | 1813352 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| IJHPJAAA_1 | 634786 | 636087 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| IJHPJAAA_1 | 1798216 | 1796324 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| IJHPJAAA_1 | 782534 | 780825 | PGM | 0.0 | phosphoglucomutase | 83.71 | 99.65 | ACH87041 |
| IJHPJAAA_1 | 1661982 | 1662992 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| IJHPJAAA_1 | 929953 | 928592 | mnmE | 0.0 | central tRNA-modifying GTPase | 81.80 | 99.56 | ABP90420 |
| IJHPJAAA_1 | 1716491 | 1714599 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| IJHPJAAA_1 | 620351 | 621241 | bglB | 1.31e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| IJHPJAAA_1 | 841817 | 840879 | SP_0676 | 2.32e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| IJHPJAAA_1 | 779801 | 780658 | metF | 8.78e-166 | methionine biosynthesis enzymes | 86.71 | 99.31 | AAK74739 |
| IJHPJAAA_1 | 1052639 | 1051935 | covR | 4.31e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| IJHPJAAA_1 | 1229252 | 1228581 | rr01 | 2.35e-123 | response regulator | 83.48 | 99.56 | CAB54566 |
| IJHPJAAA_1 | 1052639 | 1051935 | walR | 1.82e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| IJHPJAAA_1 | 310097 | 310783 | CovR | 9.91e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| IJHPJAAA_1 | 786488 | 787156 | CiaR | 1.99e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| IJHPJAAA_1 | 786488 | 787159 | ciaR | 1.96e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| IJHPJAAA_1 | 67033 | 67407 | SpxA2 | 1.14e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| IJHPJAAA_1 | 941314 | 941715 | SpxA1 | 3.71e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| IJHPJAAA_1 | 152277 | 152777 | RopE (M5005_Spy_1611) | 4.85e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| IJHPJAAA_1 | 1495403 | 1497700 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| IJHPJAAA_1 | 1702022 | 1701003 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |