Genome ID:GCA_041947055.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3245.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LKNNBKOA_520981172099166clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LKNNBKOA_520981172099152cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0998.67KR610408
LKNNBKOA_5246758248134tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline86.86100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LKNNBKOA_520981172099163clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
LKNNBKOA_5246764248134tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX85.7899.78WP_003242953.1
LKNNBKOA_534260023428596rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.00100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LKNNBKOA_511196041120785capB0.0CapsuleImmune modulation81.9699.66NP_391471
LKNNBKOA_511191401119589capC6.74e-112CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LKNNBKOA_517072481708384tufA0.0elongation factor Tu86.8195.69AHM69299
LKNNBKOA_516067501607619pdxS3.27e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
LKNNBKOA_532267043227480CodY4.62e-124nutrient-responsive regulator81.08100.00ACJ80679
LKNNBKOA_5762097761225lipA (SAUSA300_0829)1.26e-161lipoic acid synthetase80.8295.41ABD22039