Genome ID:GCA_041947065.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 2 | 4 | 4.58 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONANCLPO_4 | 2435890 | 2436939 | clbA | ARO:3002814 | clbA | 100.00 | 100.00 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ONANCLPO_4 | 2435890 | 2436925 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 89.00 | 98.67 | KR610408 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONANCLPO_4 | 2435890 | 2436936 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | EXACTX | 100.00 | 100.00 | WP_012116915.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ONANCLPO_4 | 1434412 | 1435593 | capB | 0.0 | Capsule | Immune modulation | 81.96 | 99.66 | NP_391471 |
| ONANCLPO_4 | 1433948 | 1434397 | capC | 3.07e-115 | Capsule | Immune modulation | 83.81 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ONANCLPO_4 | 2039278 | 2040414 | tufA | 0.0 | elongation factor Tu | 86.81 | 95.69 | AHM69299 |
| ONANCLPO_4 | 1938754 | 1939623 | pdxS | 3.22e-150 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| ONANCLPO_4 | 3482194 | 3482970 | CodY | 4.56e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ONANCLPO_4 | 1072421 | 1071549 | lipA (SAUSA300_0829) | 1.24e-161 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |