Genome ID：GCA_041949745.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
MIEENMPJ_28	618365	618703	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
MIEENMPJ_28	618048	618365	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
MIEENMPJ_11	604528	605697	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
MIEENMPJ_29	428727	430370	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
MIEENMPJ_11	382176	383378	blt	ARO:3003006	blt	100.00	100.00	L32599.1
MIEENMPJ_11	363815	364669	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
MIEENMPJ_29	163152	163745	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
MIEENMPJ_29	112649	114088	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
MIEENMPJ_29	99834	100754	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
MIEENMPJ_30	27376	29946	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
MIEENMPJ_11	363815	364669	aadK	Streptomycin	100.00	100.00	M26879
MIEENMPJ_29	99834	100754	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
MIEENMPJ_22	36397	37773	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
MIEENMPJ_11	363815	364666	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
MIEENMPJ_29	99834	100751	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
MIEENMPJ_22	39773	40291	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
MIEENMPJ_22	36397	37770	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
MIEENMPJ_29	428730	430370	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
MIEENMPJ_11	1046417	1049011	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
MIEENMPJ_22	526121	527263	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
MIEENMPJ_22	524457	525638	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
MIEENMPJ_22	525653	526102	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
MIEENMPJ_11	1093906	1095669	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
MIEENMPJ_22	932821	933606	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
MIEENMPJ_22	936504	937442	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
MIEENMPJ_22	933632	934828	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
MIEENMPJ_22	934857	936476	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
MIEENMPJ_22	937462	944598	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
MIEENMPJ_11	804402	805043	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
MIEENMPJ_32	28138	27002	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
MIEENMPJ_34	11309	10440	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
MIEENMPJ_28	305101	304325	CodY	8.46e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
MIEENMPJ_22	678875	678306	ClpP	6.29e-99	part of proteolytic complex	81.05	97.44	BAB94595
MIEENMPJ_28	767525	767133	spxA1	2.51e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
MIEENMPJ_33	20625	20867	SpoVG	7.52e-39	RNA-binding protein	81.48	79.41	AAT02994
MIEENMPJ_29	383258	383455	CspA	1.99e-31	cold shock protein	90.91	100.00	CAA62903
MIEENMPJ_11	792440	792246	CspD	6.79e-28	cold shock protein	81.54	98.48	CAC99957