Genome ID:GCA_041949775.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NDCMNBBH_1117836881784542aadKARO:3002627aadK100.00100.00AL009126.1
NDCMNBBH_1117649791766181bltARO:3003006blt100.00100.00L32599.1
NDCMNBBH_1115426601543829bmrARO:3003007bmr99.74100.00M33768.1
NDCMNBBH_11424865425182ykkDARO:3003064ykkD100.00100.00AL009126.1
NDCMNBBH_11424527424865ykkCARO:3003063ykkC100.00100.00AL009126.1
NDCMNBBH_32358869359789mphKARO:3004541mphK100.00100.00CP010314.1
NDCMNBBH_32345535346974lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
NDCMNBBH_32295878296471tmrBARO:3003059tmrB100.00100.00AL009126.3
NDCMNBBH_34276656279226Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
NDCMNBBH_322925330896vmlRARO:3004476vmlR100.00100.00NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NDCMNBBH_1117836881784542aadKStreptomycin100.00100.00M26879
NDCMNBBH_32358869359789mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
NDCMNBBH_2110089951010371tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NDCMNBBH_1117836911784542aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
NDCMNBBH_32358872359789mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
NDCMNBBH_2110064771006995satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
NDCMNBBH_2110089981010371tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
NDCMNBBH_322925330893vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
NDCMNBBH_1110993461101940rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NDCMNBBH_21519252520394capA0.0CapsuleImmune modulation100.00100.00NP_391469
NDCMNBBH_21520877522058capB0.0CapsuleImmune modulation100.00100.00NP_391471
NDCMNBBH_21520413520862capC0.0CapsuleImmune modulation100.00100.00NP_391470
NDCMNBBH_1110526881054451dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
NDCMNBBH_21112909113694dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
NDCMNBBH_21109073110011dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
NDCMNBBH_21111687112883dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
NDCMNBBH_21110039111658dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
NDCMNBBH_21101917109053dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
NDCMNBBH_1113433141343955hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NDCMNBBH_353178332919tufA0.0elongation factor Tu84.9695.69AHM69299
NDCMNBBH_371130910440pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
NDCMNBBH_11738129738905CodY1.84e-124nutrient-responsive regulator81.08100.00ACJ80679
NDCMNBBH_21367640368209ClpP6.29e-99part of proteolytic complex81.0597.44BAB94595
NDCMNBBH_11275705276097spxA15.45e-69redox-responsive transcription factor83.21100.00AAF21893
NDCMNBBH_362062520867SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
NDCMNBBH_327636576168CspA1.98e-31cold shock protein90.91100.00CAA62903