Genome ID：GCA_042187345.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	33	41.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LMMGOCDP_23	19508	20377	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
LMMGOCDP_23	20377	20970	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
LMMGOCDP_29	20789	21598	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
LMMGOCDP_23	20377	20970	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
LMMGOCDP_29	21582	22538	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
LMMGOCDP_29	22535	23683	STU_RS16255	0.0	Capsule	Immune modulation	99.74	100.00	WP_041828290
LMMGOCDP_23	20377	20970	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
LMMGOCDP_29	27179	28030	rfbD	0.0	Capsule	Immune modulation	99.65	100.00	WP_014621820
LMMGOCDP_1	13093	14751	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
LMMGOCDP_29	19584	20789	STU_RS16240	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226326
LMMGOCDP_29	23792	24802	STU_RS16260	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226330
LMMGOCDP_29	16728	18512	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
LMMGOCDP_29	18509	19564	STU_RS16235	0.0	Capsule	Immune modulation	99.43	100.00	WP_002948022
LMMGOCDP_4	141521	142282	srtA	0.0	Sortase A	Exoenzyme	99.21	100.00	-
LMMGOCDP_27	83651	84619	cbpD	0.0	Autolysin	Exoenzyme	98.76	100.00	WP_082302295
LMMGOCDP_1	108619	110034	STER_RS05250	0.0	Capsule	Immune modulation	98.52	100.00	WP_011681165
LMMGOCDP_1	121025	121756	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
LMMGOCDP_1	187706	188494	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.36	99.75	-
LMMGOCDP_1	121025	121756	STER_RS05315	0.0	Capsule	Immune modulation	98.09	100.00	WP_011681176
LMMGOCDP_1	121025	121756	STR_RS05260	0.0	Capsule	Immune modulation	97.68	100.00	WP_011227248
LMMGOCDP_1	121757	123217	STER_RS05320	0.0	Capsule	Immune modulation	97.54	100.00	WP_011681177
LMMGOCDP_29	24805	26076	STU_RS16265	0.0	Capsule	Immune modulation	97.48	99.76	WP_011226331
LMMGOCDP_1	119574	120314	STU_RS14635	0.0	Capsule	Immune modulation	97.30	100.00	WP_011226046
LMMGOCDP_1	119574	120314	STER_RS05305	0.0	Capsule	Immune modulation	96.90	100.00	WP_011681174
LMMGOCDP_1	119579	120314	STR_RS05250	0.0	Capsule	Immune modulation	96.33	98.13	WP_011227246
LMMGOCDP_1	121757	123217	STU_RS14650	0.0	Capsule	Immune modulation	96.23	100.21	WP_011226049
LMMGOCDP_1	118150	119517	STU_RS14630	0.0	Capsule	Immune modulation	95.47	100.00	WP_011226045
LMMGOCDP_1	121757	123217	STR_RS05265	0.0	Capsule	Immune modulation	95.41	100.21	WP_041827043
LMMGOCDP_1	120324	121016	STR_RS05255	0.0	Capsule	Immune modulation	95.40	99.86	WP_011227247
LMMGOCDP_1	120324	121016	STU_RS14640	0.0	Capsule	Immune modulation	95.40	99.86	WP_011226047
LMMGOCDP_1	118152	119517	STER_RS05300	0.0	Capsule	Immune modulation	94.22	99.85	WP_011681173
LMMGOCDP_1	120324	121016	STER_RS05310	0.0	Capsule	Immune modulation	89.47	100.00	WP_011681175
LMMGOCDP_30	35734	37037	eno	0.0	Streptococcal enolase	Exoenzyme	88.09	99.54	WP_000022832
LMMGOCDP_8	1728	2738	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.44	99.41	WP_002986042
LMMGOCDP_28	60807	62090	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
LMMGOCDP_23	21399	22445	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LMMGOCDP_4	138834	137851	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
LMMGOCDP_36	13785	12712	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
LMMGOCDP_35	85024	87327	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
LMMGOCDP_12	50138	49170	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
LMMGOCDP_7	11361	9115	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
LMMGOCDP_4	68938	67457	SPD_0310	0.0	UPF0371 protein SPD_0310	91.50	100.00	ABJ54480
LMMGOCDP_34	40605	41597	recA	0.0	DNA recombination and repair	91.24	85.31	AAL00560
LMMGOCDP_34	4494	5465	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
LMMGOCDP_29	77988	76837	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
LMMGOCDP_29	43020	41032	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
LMMGOCDP_4	155055	156785	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.87	100.00	AAK34199
LMMGOCDP_16	27059	28537	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
LMMGOCDP_16	42248	44140	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
LMMGOCDP_30	35734	37035	Eno	0.0	enolase	85.98	99.77	ABP90468
LMMGOCDP_7	6190	7899	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
LMMGOCDP_5	17723	18733	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
LMMGOCDP_1	41240	39879	mnmE	0.0	central tRNA-modifying GTPase	81.80	99.56	ABP90420
LMMGOCDP_16	123216	125108	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
LMMGOCDP_30	21307	22197	bglB	1.20e-179	putative phospho--glucosidase	88.55	99.66	AAK33487
LMMGOCDP_32	41241	42176	SP_0676	2.09e-169	transcription facot	81.73	96.89	AAK74821
LMMGOCDP_7	8923	8066	metF	4.31e-166	methionine biosynthesis enzymes	86.01	99.31	AAK74739
LMMGOCDP_1	160021	159317	covR	4.48e-132	responder protein	85.53	100.00	AAK71319
LMMGOCDP_4	87906	88577	rr01	4.71e-124	response regulator	83.04	99.56	CAB54566
LMMGOCDP_1	160021	159317	walR	1.89e-122	DNA-binding response regulator	82.13	100.00	ANC99504
LMMGOCDP_7	2236	1568	CiaR	8.79e-120	two-component response regulator	84.75	99.55	AAK74935
LMMGOCDP_31	94672	95358	CovR	5.75e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
LMMGOCDP_7	2236	1565	ciaR	9.53e-118	two component system response regulator	82.59	99.12	AIK75708
LMMGOCDP_34	41894	42289	SpxA2	8.50e-76	transcriptional regulator	90.91	100.00	ERL21461
LMMGOCDP_1	52599	53000	SpxA1	3.85e-67	transcriptional regulator	80.60	100.00	ERL19273
LMMGOCDP_38	13115	13402	spr0479	2.95e-49	essential gene	86.46	98.97	AAK99283
LMMGOCDP_27	125503	125757	spr1327	1.37e-44	essential gene	94.12	100.00	AAL00131
LMMGOCDP_16	75892	75629	spr0175	6.63e-42	pathogenitcity related	84.09	100.00	AAK98979
LMMGOCDP_16	75065	74799	spr0177	1.17e-33	essential gene	84.27	88.12	AAK98981
LMMGOCDP_28	60649	60149	RopE (M5005_Spy_1611)	1.81e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
LMMGOCDP_35	85024	87321	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
LMMGOCDP_16	137691	138710	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451