Genome ID:GCA_042266985.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PMKFGEBK_2503369503707ykkCARO:3003063ykkC100.00100.00AL009126.1
PMKFGEBK_2503052503369ykkDARO:3003064ykkD99.05100.00AL009126.1
PMKFGEBK_3408496410139vmlRARO:3004476vmlR98.35100.00NC_000964.3
PMKFGEBK_4296421297275aadKARO:3002627aadK98.59100.00AL009126.1
PMKFGEBK_4277667278869bltARO:3003006blt99.00100.00L32599.1
PMKFGEBK_6251851254421Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
PMKFGEBK_3155132155725tmrBARO:3003059tmrB97.46100.00AL009126.3
PMKFGEBK_3104612106051lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
PMKFGEBK_39179992719mphKARO:3004541mphK97.71100.00CP010314.1
PMKFGEBK_45640557574bmrARO:3003007bmr99.74100.00M33768.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PMKFGEBK_4296421297275aadKStreptomycin98.71100.00M26879
PMKFGEBK_39179992719mph(K)Spiramycin, Telithromycin97.50100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PMKFGEBK_4296424297275aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
PMKFGEBK_3408499410139vmlRABC-F type ribosomal protection protein VmlRBLASTX98.35100.00WP_003234144.1
PMKFGEBK_39179992716mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
PMKFGEBK_13817138689satAstreptothricin N-acetyltransferase SatABLASTX93.64100.00WP_003242546.1
PMKFGEBK_76449367090rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.65100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PMKFGEBK_1527829529010capB0.0CapsuleImmune modulation99.75100.00NP_391471
PMKFGEBK_1950886951671dhbA0.0BacillibactinNutritional/Metabolic factor99.75100.00NP_391080
PMKFGEBK_7162692163333hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
PMKFGEBK_1951697952893dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
PMKFGEBK_71024912012dep/capD0.0CapsuleImmune modulation99.32100.00NP_389723
PMKFGEBK_1529025529474capC0.0CapsuleImmune modulation99.11100.00NP_391470
PMKFGEBK_1955527962663dhbF0.0BacillibactinNutritional/Metabolic factor98.74100.00NP_391076
PMKFGEBK_1529493530635capA0.0CapsuleImmune modulation98.69100.00NP_391469
PMKFGEBK_1954569955507dhbB0.0BacillibactinNutritional/Metabolic factor98.40100.00NP_391077
PMKFGEBK_1952922954541dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PMKFGEBK_111363512499tufA0.0elongation factor Tu84.9695.69AHM69299
PMKFGEBK_121126410395pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
PMKFGEBK_2191953191177CodY7.96e-125nutrient-responsive regulator81.08100.00ACJ80679
PMKFGEBK_1688265687696ClpP6.40e-99part of proteolytic complex81.0597.44BAB94595
PMKFGEBK_2703534703142spxA16.25e-70redox-responsive transcription factor83.97100.00AAF21893
PMKFGEBK_2703534703142spx3.73e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
PMKFGEBK_103468434442SpoVG7.50e-39RNA-binding protein81.4879.41AAT02994
PMKFGEBK_3360082360279CspA1.90e-31cold shock protein90.91100.00CAA62903
PMKFGEBK_7174565174759CspD5.78e-28cold shock protein80.0098.48CAC99957
PMKFGEBK_7174565174762CspB1.20e-27cold shock protein80.30100.00CAD00094