Genome ID：GCA_042267375.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	8	17.55

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LNCJCNME_2	503345	503683	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LNCJCNME_2	503028	503345	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LNCJCNME_4	362164	363333	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LNCJCNME_3	346390	347310	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
LNCJCNME_3	333058	334497	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
LNCJCNME_3	283384	283977	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
LNCJCNME_4	140869	142071	blt	ARO:3003006	blt	99.00	100.00	L32599.1
LNCJCNME_4	122463	123317	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
LNCJCNME_3	28970	30613	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
LNCJCNME_6	27423	29993	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.53	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LNCJCNME_4	122463	123317	aadK	Streptomycin	98.71	100.00	M26879
LNCJCNME_3	346390	347310	mph(K)	Spiramycin, Telithromycin	97.50	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LNCJCNME_4	122463	123314	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
LNCJCNME_3	28970	30610	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
LNCJCNME_3	346393	347310	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
LNCJCNME_1	1025948	1026466	satA	streptothricin N-acetyltransferase SatA	BLASTX	93.64	100.00	WP_003242546.1
LNCJCNME_7	157839	160436	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.65	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LNCJCNME_1	535627	536808	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
LNCJCNME_1	112966	113751	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.75	100.00	NP_391080
LNCJCNME_7	61596	62237	hlyIII	0.0	Hemolysin III	Exotoxin	99.69	100.00	NP_390062
LNCJCNME_1	111744	112940	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.33	100.00	NP_391079
LNCJCNME_7	212917	214680	dep/capD	0.0	Capsule	Immune modulation	99.32	100.00	NP_389723
LNCJCNME_1	535163	535612	capC	0.0	Capsule	Immune modulation	99.11	100.00	NP_391470
LNCJCNME_1	101974	109110	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.74	100.00	NP_391076
LNCJCNME_1	534002	535144	capA	0.0	Capsule	Immune modulation	98.69	100.00	NP_391469
LNCJCNME_1	109130	110068	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.40	100.00	NP_391077
LNCJCNME_1	110096	111715	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.41	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LNCJCNME_11	13636	12500	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LNCJCNME_12	11264	10395	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LNCJCNME_2	191929	191153	CodY	7.96e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LNCJCNME_1	376372	376941	ClpP	6.40e-99	part of proteolytic complex	81.05	97.44	BAB94595
LNCJCNME_2	703510	703118	spxA1	6.25e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LNCJCNME_2	703510	703118	spx	3.73e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LNCJCNME_10	34684	34442	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
LNCJCNME_3	79027	78830	CspA	1.90e-31	cold shock protein	90.91	100.00	CAA62903
LNCJCNME_7	50364	50170	CspD	5.76e-28	cold shock protein	80.00	98.48	CAC99957
LNCJCNME_7	50364	50167	CspB	1.19e-27	cold shock protein	80.30	100.00	CAD00094