Genome ID：GCA_042271105.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	8	17.55

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LHCGIODF_1	265105	266025	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
LHCGIODF_2	255842	256696	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
LHCGIODF_1	251773	253212	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
LHCGIODF_2	238795	239997	blt	ARO:3003006	blt	99.50	100.00	L32599.1
LHCGIODF_1	202145	202738	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LHCGIODF_5	71642	71980	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LHCGIODF_5	71325	71642	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LHCGIODF_21	49574	51217	vmlR	ARO:3004476	vmlR	99.09	100.00	NC_000964.3
LHCGIODF_26	27413	29983	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.53	100.00	AL009126.3
LHCGIODF_2	12451	13620	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LHCGIODF_2	255842	256696	aadK	Streptomycin	98.83	100.00	M26879
LHCGIODF_1	265105	266025	mph(K)	Spiramycin, Telithromycin	97.72	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LHCGIODF_21	49577	51217	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	99.09	100.00	WP_003234144.1
LHCGIODF_2	255845	256696	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
LHCGIODF_1	265108	266025	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
LHCGIODF_14	58138	58656	satA	streptothricin N-acetyltransferase SatA	BLASTX	94.80	100.00	WP_003242546.1
LHCGIODF_25	52317	54914	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.29	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LHCGIODF_24	61585	62226	hlyIII	0.0	Hemolysin III	Exotoxin	99.69	100.00	NP_390062
LHCGIODF_18	41530	42711	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LHCGIODF_15	72479	73264	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LHCGIODF_15	73290	74486	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.33	100.00	NP_391079
LHCGIODF_25	6548	8311	dep/capD	0.0	Capsule	Immune modulation	98.98	100.00	NP_389723
LHCGIODF_18	43194	44336	capA	0.0	Capsule	Immune modulation	98.69	100.00	NP_391469
LHCGIODF_18	42726	43175	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470
LHCGIODF_15	76162	77100	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.40	100.00	NP_391077
LHCGIODF_15	77120	84256	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.36	100.00	NP_391076
LHCGIODF_15	74515	76134	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.41	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LHCGIODF_30	32019	33155	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LHCGIODF_41	11262	10393	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LHCGIODF_34	879	103	CodY	3.11e-126	nutrient-responsive regulator	81.08	100.00	ACJ80679
LHCGIODF_6	172625	173194	ClpP	1.13e-99	part of proteolytic complex	81.05	97.44	BAB94595
LHCGIODF_3	207460	207852	spxA1	1.60e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LHCGIODF_3	207460	207852	spx	9.53e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LHCGIODF_31	10546	10788	SpoVG	6.14e-39	RNA-binding protein	81.48	79.41	AAT02994
LHCGIODF_21	5781	5978	CspA	3.47e-32	cold shock protein	90.91	100.00	CAA62903
LHCGIODF_24	50353	50159	CspD	1.63e-28	cold shock protein	80.00	98.48	CAC99957
LHCGIODF_24	50353	50156	CspB	3.37e-28	cold shock protein	80.30	100.00	CAD00094