Genome ID:GCA_042274205.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 9 | 18.03 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KMLKIFPB_2 | 495119 | 495457 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KMLKIFPB_2 | 494802 | 495119 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KMLKIFPB_3 | 412117 | 413760 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.00 | NC_000964.3 |
| KMLKIFPB_4 | 366252 | 367421 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| KMLKIFPB_3 | 161704 | 162297 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| KMLKIFPB_4 | 142437 | 143639 | blt | ARO:3003006 | blt | 98.75 | 100.00 | L32599.1 |
| KMLKIFPB_4 | 123647 | 124501 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| KMLKIFPB_3 | 111146 | 112579 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| KMLKIFPB_3 | 98331 | 99251 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| KMLKIFPB_9 | 27413 | 29983 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KMLKIFPB_1 | 825511 | 826887 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.42 | 100.00 | D12567 |
| KMLKIFPB_3 | 98331 | 99251 | mph(K) | Spiramycin, Telithromycin | 99.13 | 100.00 | NC_000964 |
| KMLKIFPB_4 | 123647 | 124499 | aadK | Streptomycin | 98.12 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KMLKIFPB_1 | 825514 | 826887 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.34 | 100.00 | WP_063856081.1 |
| KMLKIFPB_3 | 98331 | 99248 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| KMLKIFPB_3 | 412120 | 413760 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| KMLKIFPB_4 | 123647 | 124498 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| KMLKIFPB_1 | 822983 | 823501 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KMLKIFPB_1 | 341217 | 342398 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| KMLKIFPB_7 | 76984 | 84120 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391076 |
| KMLKIFPB_5 | 275363 | 276004 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| KMLKIFPB_7 | 72343 | 73128 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| KMLKIFPB_7 | 76026 | 76964 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| KMLKIFPB_7 | 73154 | 74350 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| KMLKIFPB_5 | 129796 | 131559 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| KMLKIFPB_7 | 74379 | 75998 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.07 | 100.00 | NP_391078 |
| KMLKIFPB_1 | 339592 | 340734 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| KMLKIFPB_1 | 340753 | 341202 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KMLKIFPB_15 | 31733 | 32869 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KMLKIFPB_18 | 11216 | 10347 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KMLKIFPB_2 | 185306 | 184530 | CodY | 6.52e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KMLKIFPB_1 | 179856 | 180425 | ClpP | 5.13e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| KMLKIFPB_2 | 647339 | 646947 | spxA1 | 5.13e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| KMLKIFPB_2 | 647339 | 646947 | spx | 3.06e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| KMLKIFPB_13 | 20595 | 20837 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| KMLKIFPB_3 | 362560 | 362757 | CspA | 1.91e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| KMLKIFPB_5 | 287967 | 288161 | CspD | 2.08e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| KMLKIFPB_11 | 36516 | 36710 | CspB | 6.39e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |