Genome ID:GCA_042715415.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIBLKPKL_1 | 296601 | 297095 | lnuC | ARO:3002837 | lnuC | 97.56 | 100.00 | AY928180.1 |
| BIBLKPKL_4 | 9845 | 11770 | tet(M) | ARO:3000186 | tet(M) | 98.60 | 100.31 | AB039845.1 |
| BIBLKPKL_4 | 5137 | 5784 | catA8 | ARO:3004658 | catA8 | 98.60 | 100.00 | JQ922409.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BIBLKPKL_4 | 5137 | 5784 | cat | Chloramphenicol | 99.54 | 100.00 | U35036 |
| BIBLKPKL_4 | 9845 | 11770 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.48 | 100.00 | AM990992 |
| BIBLKPKL_1 | 296601 | 297095 | lnu(C) | Lincomycin | 98.99 | 100.00 | AY928180 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIBLKPKL_4 | 9848 | 11770 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.38 | 100.00 | WP_000691736.1 |
| BIBLKPKL_4 | 5140 | 5784 | catA | type A-8 chloramphenicol O-acetyltransferase | BLASTX | 99.07 | 100.00 | WP_002352254.1 |
| BIBLKPKL_1 | 296601 | 297092 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 97.56 | 100.00 | WP_063851341.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BIBLKPKL_1 | 50151 | 50858 | WalR | 6.30e-115 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |