Genome ID：GCA_042860965.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
14	10	9	19.42

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CBEBCIHK_22	676923	678092	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
CBEBCIHK_11	591190	591528	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
CBEBCIHK_11	590873	591190	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
CBEBCIHK_22	454572	455774	blt	ARO:3003006	blt	100.00	100.00	L32599.1
CBEBCIHK_22	436211	437065	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
CBEBCIHK_45	276349	278919	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
CBEBCIHK_41	256233	257153	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
CBEBCIHK_41	242899	244338	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
CBEBCIHK_41	200576	201226	Streptococcus suis chloramphenicol acetyltransferase	ARO:3004455	Ssui_ACT_CHL	94.91	100.00	AB080798.1
CBEBCIHK_41	189008	189601	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
CBEBCIHK_48	47320	48963	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CBEBCIHK_22	436211	437065	aadK	Streptomycin	100.00	100.00	M26879
CBEBCIHK_41	200576	201226	cat(pC194)	Chloramphenicol	100.00	100.00	NC_002013
CBEBCIHK_41	256233	257153	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
CBEBCIHK_49	32613	33989	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CBEBCIHK_22	436211	437062	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
CBEBCIHK_41	200579	201226	catA	type A-9 chloramphenicol O-acetyltransferase	EXACTX	100.00	100.00	WP_001010387.1
CBEBCIHK_41	256236	257153	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
CBEBCIHK_49	30095	30613	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
CBEBCIHK_49	32616	33989	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
CBEBCIHK_48	47323	48963	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
CBEBCIHK_47	55848	58442	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CBEBCIHK_31	519082	520224	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
CBEBCIHK_31	520707	521888	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
CBEBCIHK_31	520243	520692	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
CBEBCIHK_47	9190	10953	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
CBEBCIHK_31	112772	113557	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
CBEBCIHK_31	108936	109874	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
CBEBCIHK_31	111550	112746	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
CBEBCIHK_31	109902	111521	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
CBEBCIHK_31	101780	108916	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
CBEBCIHK_22	876803	877444	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CBEBCIHK_41	201705	204767	lacZ	0.0	beta-galactosidase	99.22	99.61	AAA24053
CBEBCIHK_1	27982	26846	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
CBEBCIHK_4	11169	10300	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
CBEBCIHK_11	277926	277150	CodY	8.23e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
CBEBCIHK_31	367495	368064	ClpP	4.07e-99	part of proteolytic complex	81.05	97.44	BAB94595
CBEBCIHK_11	740351	739959	spxA1	2.44e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
CBEBCIHK_2	34633	34391	SpoVG	2.72e-38	RNA-binding protein	80.25	79.41	AAT02994
CBEBCIHK_48	1848	2045	CspA	3.36e-32	cold shock protein	90.91	100.00	CAA62903
CBEBCIHK_22	864841	864647	CspD	5.69e-28	cold shock protein	81.54	98.48	CAC99957