Genome ID:GCA_042938425.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IJJLPMLF_136272493628298clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IJJLPMLF_136272633628298cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
IJJLPMLF_115918811593257tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IJJLPMLF_136272523628298clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
IJJLPMLF_115918811593251tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.2199.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IJJLPMLF_1655565656746capB0.0CapsuleImmune modulation81.9699.66NP_391471
IJJLPMLF_1656761657210capC6.93e-112CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IJJLPMLF_13894537809tufA0.0elongation factor Tu86.8195.69AHM69299
IJJLPMLF_1153735152866pdxS3.36e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
IJJLPMLF_125610222560246CodY4.76e-124nutrient-responsive regulator81.08100.00ACJ80679
IJJLPMLF_110694461070318lipA (SAUSA300_0829)1.29e-161lipoic acid synthetase80.8295.41ABD22039