Genome ID:GCA_043950685.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FCHCBIHG_133801853381234clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FCHCBIHG_133801853381220cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0998.67KR610408
FCHCBIHG_113956911397067tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.07100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FCHCBIHG_133801853381231clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
FCHCBIHG_113956971397067tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.4399.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FCHCBIHG_123276462328827capB0.0CapsuleImmune modulation81.8799.66NP_391471
FCHCBIHG_123271822327631capC1.51e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FCHCBIHG_129577762958912tufA0.0elongation factor Tu86.8195.69AHM69299
FCHCBIHG_128428792843748pdxS3.40e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
FCHCBIHG_1413984414760CodY4.81e-124nutrient-responsive regulator81.08100.00ACJ80679
FCHCBIHG_119180511917179lipA (SAUSA300_0829)1.31e-161lipoic acid synthetase80.8295.41ABD22039