Genome ID：GCA_044004645.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
4	2	6	7.48

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
ILNADEDF_20	355147	356193	clbA	ARO:3002814	clbA	92.77	99.71	CP006845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
ILNADEDF_20	355147	356190	cfr(B)	Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin	88.90	99.33	KR610408
ILNADEDF_19	169506	170883	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	87.08	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
ILNADEDF_20	355147	356190	clbA	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA	BLASTX	92.24	99.71	WP_012116915.1
ILNADEDF_19	169555	170877	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	86.85	96.29	WP_003242953.1
ILNADEDF_20	352884	353396	satA	streptothricin N-acetyltransferase SatA	BLASTX	81.50	100.00	WP_003242546.1
ILNADEDF_2	5191	7788	rphC	rifamycin-inactivating phosphotransferase RphC	INTERNAL_STOP	80.94	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
ILNADEDF_12	352420	353601	capB	0.0	Capsule	Immune modulation	81.87	99.66	NP_391471
ILNADEDF_12	351956	352405	capC	2.67e-114	Capsule	Immune modulation	83.59	99.78	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
ILNADEDF_3	27510	26374	tufA	0.0	elongation factor Tu	86.54	95.69	AHM69299
ILNADEDF_6	4234	5103	pdxS	8.66e-153	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	84.48	98.31	ACE61268
ILNADEDF_1	195249	194473	CodY	7.76e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
ILNADEDF_1	653728	653336	spxA1	3.88e-69	redox-responsive transcription factor	82.44	100.00	AAF21893
ILNADEDF_20	338649	338846	CspA	5.79e-32	cold shock protein	92.42	100.00	CAA62903
ILNADEDF_19	542982	542788	CspD	1.65e-27	cold shock protein	80.00	98.48	CAC99957
ILNADEDF_19	542982	542785	CspB	3.43e-27	cold shock protein	80.30	100.00	CAD00094
ILNADEDF_20	338649	338843	CspR	2.87e-26	cold shock protein	80.00	98.48	AAO82613