Genome ID:GCA_044499385.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IANDFCOA_1 | 2729832 | 2730686 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| IANDFCOA_1 | 2710654 | 2711856 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| IANDFCOA_1 | 2482822 | 2483991 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| IANDFCOA_1 | 1350014 | 1350331 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| IANDFCOA_1 | 1349676 | 1350014 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IANDFCOA_1 | 886469 | 889039 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| IANDFCOA_1 | 591333 | 592976 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| IANDFCOA_1 | 286737 | 288170 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| IANDFCOA_1 | 273921 | 274841 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IANDFCOA_1 | 4202345 | 4203721 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
| IANDFCOA_1 | 2729834 | 2730686 | aadK | Streptomycin | 98.48 | 99.77 | M26879 |
| IANDFCOA_1 | 273921 | 274841 | mph(K) | Spiramycin, Telithromycin | 97.50 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IANDFCOA_1 | 4202348 | 4203721 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| IANDFCOA_1 | 591336 | 592976 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| IANDFCOA_1 | 273921 | 274838 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| IANDFCOA_1 | 2729835 | 2730686 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| IANDFCOA_1 | 4199828 | 4200346 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| IANDFCOA_1 | 2050800 | 2053397 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.40 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IANDFCOA_1 | 2283660 | 2284301 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| IANDFCOA_1 | 3708984 | 3710165 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| IANDFCOA_1 | 3707359 | 3708501 | capA | 0.0 | Capsule | Immune modulation | 99.39 | 100.00 | NP_391469 |
| IANDFCOA_1 | 3294469 | 3295254 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| IANDFCOA_1 | 3290633 | 3291571 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| IANDFCOA_1 | 3708520 | 3708969 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| IANDFCOA_1 | 3293247 | 3294443 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| IANDFCOA_1 | 2004216 | 2005979 | dep/capD | 0.0 | Capsule | Immune modulation | 99.09 | 100.00 | NP_389723 |
| IANDFCOA_1 | 3283477 | 3290613 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.09 | 100.00 | NP_391076 |
| IANDFCOA_1 | 3291599 | 3293218 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IANDFCOA_1 | 132399 | 133535 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IANDFCOA_1 | 18665 | 19534 | pdxS | 3.14e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IANDFCOA_1 | 1659913 | 1660689 | CodY | 3.43e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IANDFCOA_1 | 3547626 | 3548195 | ClpP | 2.54e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |