Genome ID:GCA_045037805.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HLDDABII_1 | 1995203 | 1997125 | tet(W) | ARO:3000194 | tet(W) | 96.39 | 100.16 | AJ222769.3 |
| HLDDABII_3 | 21027 | 22454 | fexA | ARO:3002704 | fexA | 97.68 | 100.00 | AJ549214.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HLDDABII_3 | 21027 | 22454 | fexA | Chloramphenicol, Florfenicol | 99.16 | 100.00 | AJ549214 |
| HLDDABII_1 | 1995203 | 1997115 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.85 | 99.64 | FN396364 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HLDDABII_1 | 1995203 | 1997116 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.06 | 99.84 | WP_000691721.1 |
| HLDDABII_3 | 21027 | 22451 | fexA | chloramphenicol/florfenicol efflux MFS transporter FexA | BLASTX | 97.68 | 100.00 | WP_015585966.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||