Genome ID:GCA_046529435.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHJPKFHL_1 | 2482500 | 2483354 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| GHJPKFHL_1 | 2464062 | 2465264 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| GHJPKFHL_1 | 2282922 | 2284091 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| GHJPKFHL_1 | 1397217 | 1397534 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| GHJPKFHL_1 | 1396879 | 1397217 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| GHJPKFHL_1 | 904560 | 907130 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| GHJPKFHL_1 | 601330 | 602976 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| GHJPKFHL_1 | 335678 | 336271 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| GHJPKFHL_1 | 287847 | 289280 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| GHJPKFHL_1 | 275033 | 275953 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GHJPKFHL_1 | 4026197 | 4027573 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.13 | 100.00 | D12567 |
| GHJPKFHL_1 | 2482500 | 2483354 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| GHJPKFHL_1 | 275033 | 275953 | mph(K) | Spiramycin, Telithromycin | 98.37 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHJPKFHL_1 | 4026200 | 4027573 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| GHJPKFHL_1 | 275033 | 275950 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| GHJPKFHL_1 | 2482503 | 2483354 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| GHJPKFHL_1 | 601333 | 602976 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| GHJPKFHL_1 | 4023677 | 4024195 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GHJPKFHL_1 | 3522189 | 3523370 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| GHJPKFHL_1 | 3028749 | 3029534 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| GHJPKFHL_1 | 3520564 | 3521706 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| GHJPKFHL_1 | 3024913 | 3025851 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| GHJPKFHL_1 | 1947473 | 1949236 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| GHJPKFHL_1 | 2064619 | 2065260 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| GHJPKFHL_1 | 3521725 | 3522174 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| GHJPKFHL_1 | 3017757 | 3024893 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 100.00 | NP_391076 |
| GHJPKFHL_1 | 3027527 | 3028723 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.83 | 100.00 | NP_391079 |
| GHJPKFHL_1 | 3025879 | 3027498 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.28 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GHJPKFHL_1 | 132531 | 133667 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| GHJPKFHL_1 | 18600 | 19469 | pdxS | 3.01e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| GHJPKFHL_1 | 1714088 | 1714864 | CodY | 3.29e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| GHJPKFHL_1 | 3372181 | 3372750 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |