Genome ID:GCA_046529465.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210416.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GPIIDAOF_124811222481976aadKARO:3002627aadK98.59100.00AL009126.1
GPIIDAOF_124626842463886bltARO:3003006blt99.25100.00L32599.1
GPIIDAOF_122815442282713bmrARO:3003007bmr99.49100.00M33768.1
GPIIDAOF_113972161397533ykkDARO:3003064ykkD98.10100.00AL009126.1
GPIIDAOF_113968781397216ykkCARO:3003063ykkC99.11100.00AL009126.1
GPIIDAOF_1904559907129Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
GPIIDAOF_1601329602975vmlRARO:3004476vmlR98.36100.18NC_000964.3
GPIIDAOF_1335677336270tmrBARO:3003059tmrB97.97100.00AL009126.3
GPIIDAOF_1287846289279lmrBARO:3002813lmrB99.79100.00JYFL01000006.1
GPIIDAOF_1275032275952mphKARO:3004541mphK98.69100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GPIIDAOF_140248194026195tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.13100.00D12567
GPIIDAOF_124811222481976aadKStreptomycin98.83100.00M26879
GPIIDAOF_1275032275952mph(K)Spiramycin, Telithromycin98.37100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GPIIDAOF_140248224026195tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_063856081.1
GPIIDAOF_1275032275949mphKmacrolide 2'-phosphotransferase MphKBLASTX98.69100.00WP_003246254.1
GPIIDAOF_124811252481976aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
GPIIDAOF_1601332602975vmlRABC-F type ribosomal protection protein VmlRBLASTX98.36100.00WP_003234144.1
GPIIDAOF_140222994022817satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GPIIDAOF_135208113521992capB0.0CapsuleImmune modulation99.66100.00NP_391471
GPIIDAOF_130273713028156dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
GPIIDAOF_135191863520328capA0.0CapsuleImmune modulation99.30100.00NP_391469
GPIIDAOF_130235353024473dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
GPIIDAOF_119460951947858dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
GPIIDAOF_120632412063882hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
GPIIDAOF_135203473520796capC0.0CapsuleImmune modulation98.89100.00NP_391470
GPIIDAOF_130163793023515dhbF0.0BacillibactinNutritional/Metabolic factor98.61100.00NP_391076
GPIIDAOF_130261493027345dhbC0.0BacillibactinNutritional/Metabolic factor97.83100.00NP_391079
GPIIDAOF_130245013026120dhbE0.0BacillibactinNutritional/Metabolic factor97.28100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GPIIDAOF_1132531133667tufA0.0elongation factor Tu85.7595.69AHM69299
GPIIDAOF_11860019469pdxS3.01e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GPIIDAOF_117140871714863CodY3.29e-124nutrient-responsive regulator81.08100.00ACJ80679
GPIIDAOF_133708033371372ClpP2.44e-98part of proteolytic complex81.0597.44BAB94595