Genome ID:GCA_046529465.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPIIDAOF_1 | 2481122 | 2481976 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| GPIIDAOF_1 | 2462684 | 2463886 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| GPIIDAOF_1 | 2281544 | 2282713 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| GPIIDAOF_1 | 1397216 | 1397533 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| GPIIDAOF_1 | 1396878 | 1397216 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| GPIIDAOF_1 | 904559 | 907129 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| GPIIDAOF_1 | 601329 | 602975 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| GPIIDAOF_1 | 335677 | 336270 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| GPIIDAOF_1 | 287846 | 289279 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| GPIIDAOF_1 | 275032 | 275952 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GPIIDAOF_1 | 4024819 | 4026195 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.13 | 100.00 | D12567 |
| GPIIDAOF_1 | 2481122 | 2481976 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| GPIIDAOF_1 | 275032 | 275952 | mph(K) | Spiramycin, Telithromycin | 98.37 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPIIDAOF_1 | 4024822 | 4026195 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| GPIIDAOF_1 | 275032 | 275949 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| GPIIDAOF_1 | 2481125 | 2481976 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| GPIIDAOF_1 | 601332 | 602975 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| GPIIDAOF_1 | 4022299 | 4022817 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GPIIDAOF_1 | 3520811 | 3521992 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| GPIIDAOF_1 | 3027371 | 3028156 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| GPIIDAOF_1 | 3519186 | 3520328 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| GPIIDAOF_1 | 3023535 | 3024473 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| GPIIDAOF_1 | 1946095 | 1947858 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| GPIIDAOF_1 | 2063241 | 2063882 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| GPIIDAOF_1 | 3520347 | 3520796 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| GPIIDAOF_1 | 3016379 | 3023515 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 100.00 | NP_391076 |
| GPIIDAOF_1 | 3026149 | 3027345 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.83 | 100.00 | NP_391079 |
| GPIIDAOF_1 | 3024501 | 3026120 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.28 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GPIIDAOF_1 | 132531 | 133667 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| GPIIDAOF_1 | 18600 | 19469 | pdxS | 3.01e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| GPIIDAOF_1 | 1714087 | 1714863 | CodY | 3.29e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| GPIIDAOF_1 | 3370803 | 3371372 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |