Genome ID：GCA_046531545.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
2	20	29	35.28

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
OMGAGMEM_1	646503	647720	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
OMGAGMEM_1	647840	649303	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
OMGAGMEM_1	646503	647717	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
OMGAGMEM_1	647840	649300	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
OMGAGMEM_1	1601962	1602677	STER_RS07085	0.0	Capsule	Immune modulation	96.65	99.86	WP_011681442
OMGAGMEM_1	993522	994262	STER_RS05305	0.0	Capsule	Immune modulation	95.01	100.00	WP_011681174
OMGAGMEM_1	1605987	1606838	rfbD	0.0	Capsule	Immune modulation	94.72	100.00	WP_014621820
OMGAGMEM_1	1602679	1603647	STER_RS07090	0.0	Capsule	Immune modulation	94.63	100.00	WP_011681443
OMGAGMEM_1	993522	994262	STU_RS14635	0.0	Capsule	Immune modulation	94.33	100.00	WP_011226046
OMGAGMEM_1	990619	992079	STU_RS14650	0.0	Capsule	Immune modulation	94.05	100.14	WP_011226049
OMGAGMEM_1	994319	995686	STU_RS14630	0.0	Capsule	Immune modulation	93.93	100.00	WP_011226045
OMGAGMEM_1	990619	992079	STER_RS05320	0.0	Capsule	Immune modulation	93.91	100.00	WP_011681177
OMGAGMEM_1	993522	994257	STR_RS05250	0.0	Capsule	Immune modulation	93.75	98.13	WP_011227246
OMGAGMEM_1	994319	995684	STER_RS05300	0.0	Capsule	Immune modulation	93.63	99.85	WP_011681173
OMGAGMEM_1	990619	992079	STR_RS05265	0.0	Capsule	Immune modulation	93.16	100.14	WP_041827043
OMGAGMEM_1	1600840	1601616	STER_RS07075	0.0	Capsule	Immune modulation	92.66	100.00	WP_011681440
OMGAGMEM_1	1604615	1605868	STER_RS07100	0.0	Capsule	Immune modulation	92.51	99.52	WP_011681445
OMGAGMEM_1	992080	992811	STU_RS14645	0.0	Capsule	Immune modulation	91.94	100.00	WP_011226048
OMGAGMEM_1	818827	819420	STR_RS05880	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
OMGAGMEM_1	818827	819420	STER_RS06030	0.0	Capsule	Immune modulation	91.58	100.00	WP_011226149
OMGAGMEM_1	818827	819420	STU_RS15260	0.0	Capsule	Immune modulation	91.58	100.00	WP_011226149
OMGAGMEM_1	992080	992811	STER_RS05315	0.0	Capsule	Immune modulation	91.53	100.00	WP_011681176
OMGAGMEM_1	817958	818827	rfbA	0.0	Capsule	Immune modulation	91.38	100.00	WP_011681286
OMGAGMEM_1	1100372	1102029	fbp54	0.0	FBPs	Adherence	91.14	99.88	WP_011227179
OMGAGMEM_1	992080	992811	STR_RS05260	0.0	Capsule	Immune modulation	90.98	100.00	WP_011227248
OMGAGMEM_1	36873	37712	cbpD	0.0	Autolysin	Exoenzyme	90.95	100.00	WP_011226733
OMGAGMEM_1	1906854	1907864	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.45	99.80	WP_002986042
OMGAGMEM_1	618395	619698	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
OMGAGMEM_1	992820	993512	STR_RS05255	0.0	Capsule	Immune modulation	88.04	99.86	WP_011227247
OMGAGMEM_1	992820	993512	STU_RS14640	0.0	Capsule	Immune modulation	88.04	99.86	WP_011226047
OMGAGMEM_1	992820	993512	STER_RS05310	0.0	Capsule	Immune modulation	87.46	99.86	WP_011681175
OMGAGMEM_1	1247393	1248154	srtA	0.0	Sortase A	Exoenzyme	84.40	99.87	-
OMGAGMEM_1	819623	820669	rfbB	0.0	Capsule	Immune modulation	83.87	99.90	WP_002263087
OMGAGMEM_1	143660	144943	tig/ropA	0.0	Trigger factor	Stress survival	80.84	99.61	WP_000107753
OMGAGMEM_1	1004759	1005344	SPD_RS01775	4.52e-146	Capsule	Immune modulation	82.96	96.53	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
OMGAGMEM_1	1250842	1251825	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.34	100.00	AAK75326
OMGAGMEM_1	1239259	1238186	MntE	0.0	manganese homeostasis	95.53	99.72	ABF32167
OMGAGMEM_1	1780299	1782605	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
OMGAGMEM_1	1373394	1374875	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
OMGAGMEM_1	527853	528821	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
OMGAGMEM_1	1220199	1217953	metE	0.0	methionine biosynthesis enzymes	92.79	100.00	AAK74738
OMGAGMEM_1	22452	23423	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
OMGAGMEM_1	791159	792889	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
OMGAGMEM_1	1649104	1647953	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
OMGAGMEM_1	1620743	1618755	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
OMGAGMEM_1	2117285	2115807	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
OMGAGMEM_1	618395	619696	Eno	0.0	enolase	86.44	99.77	ABP90468
OMGAGMEM_1	2101912	2100020	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
OMGAGMEM_1	1215031	1216740	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
OMGAGMEM_1	56389	57480	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
OMGAGMEM_1	1962470	1963480	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
OMGAGMEM_1	1085908	1087269	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
OMGAGMEM_1	603979	604869	bglB	1.22e-176	putative phospho--glucosidase	87.54	99.66	AAK33487
OMGAGMEM_1	1172523	1173473	SP_0676	2.64e-169	transcription facot	81.39	98.45	AAK74821
OMGAGMEM_1	1217763	1216906	metF	2.50e-168	methionine biosynthesis enzymes	87.41	99.31	AAK74739
OMGAGMEM_1	1310795	1310124	rr01	5.14e-126	response regulator	84.38	99.56	CAB54566
OMGAGMEM_1	944954	945658	covR	9.50e-126	responder protein	85.53	100.00	AAK71319
OMGAGMEM_1	1211064	1210393	ciaR	2.46e-124	two component system response regulator	86.16	99.12	AIK75708
OMGAGMEM_1	1211064	1210396	CiaR	1.85e-123	two-component response regulator	87.00	99.55	AAK74935
OMGAGMEM_1	944954	945658	walR	2.16e-119	DNA-binding response regulator	82.13	100.00	ANC99504
OMGAGMEM_1	293970	294656	CovR	4.66e-119	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
OMGAGMEM_1	57654	58049	SpxA2	2.10e-74	transcriptional regulator	91.67	100.00	ERL21461
OMGAGMEM_1	1074437	1074036	SpxA1	5.46e-69	transcriptional regulator	82.84	100.00	ERL19273
OMGAGMEM_1	130352	130756	GrpE	3.67e-66	protein grpE	82.96	78.82	ABP89267
OMGAGMEM_1	145110	145601	RopE (M5005_Spy_1611)	1.03e-71	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
OMGAGMEM_1	1780299	1782599	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
OMGAGMEM_1	1998909	1997890	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451