Genome ID：GCA_046531625.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
2	20	29	35.28

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JNCNAFEI_1	1505266	1506483	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
JNCNAFEI_1	1503683	1505146	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JNCNAFEI_1	1505269	1506483	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
JNCNAFEI_1	1503686	1505146	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JNCNAFEI_1	544930	545642	STER_RS07085	0.0	Capsule	Immune modulation	96.09	99.72	WP_011681442
JNCNAFEI_1	540770	541621	rfbD	0.0	Capsule	Immune modulation	95.07	100.00	WP_014621820
JNCNAFEI_1	1175599	1176339	STER_RS05305	0.0	Capsule	Immune modulation	94.87	100.00	WP_011681174
JNCNAFEI_1	543960	544928	STER_RS07090	0.0	Capsule	Immune modulation	94.84	100.00	WP_011681443
JNCNAFEI_1	1175599	1176339	STU_RS14635	0.0	Capsule	Immune modulation	94.33	100.00	WP_011226046
JNCNAFEI_1	1174175	1175542	STU_RS14630	0.0	Capsule	Immune modulation	94.30	100.00	WP_011226045
JNCNAFEI_1	1174177	1175542	STER_RS05300	0.0	Capsule	Immune modulation	94.22	99.85	WP_011681173
JNCNAFEI_1	1175604	1176339	STR_RS05250	0.0	Capsule	Immune modulation	93.89	98.13	WP_011227246
JNCNAFEI_1	1177782	1179242	STU_RS14650	0.0	Capsule	Immune modulation	93.84	100.14	WP_011226049
JNCNAFEI_1	1177782	1179242	STER_RS05320	0.0	Capsule	Immune modulation	93.84	100.00	WP_011681177
JNCNAFEI_1	1177782	1179242	STR_RS05265	0.0	Capsule	Immune modulation	93.09	100.14	WP_041827043
JNCNAFEI_1	545988	546764	STER_RS07075	0.0	Capsule	Immune modulation	92.66	100.00	WP_011681440
JNCNAFEI_1	541740	542993	STER_RS07100	0.0	Capsule	Immune modulation	92.34	99.44	WP_011681445
JNCNAFEI_1	2132588	2133427	cbpD	0.0	Autolysin	Exoenzyme	92.02	100.00	WP_011226733
JNCNAFEI_1	1177050	1177781	STU_RS14645	0.0	Capsule	Immune modulation	91.67	100.00	WP_011226048
JNCNAFEI_1	1350606	1351199	STR_RS05880	0.0	Capsule	Immune modulation	91.41	100.00	WP_011226149
JNCNAFEI_1	1177050	1177781	STER_RS05315	0.0	Capsule	Immune modulation	91.26	100.00	WP_011681176
JNCNAFEI_1	1350606	1351199	STER_RS06030	0.0	Capsule	Immune modulation	91.25	100.00	WP_011226149
JNCNAFEI_1	1350606	1351199	STU_RS15260	0.0	Capsule	Immune modulation	91.25	100.00	WP_011226149
JNCNAFEI_1	1177050	1177781	STR_RS05260	0.0	Capsule	Immune modulation	90.71	100.00	WP_011227248
JNCNAFEI_1	1061607	1063265	fbp54	0.0	FBPs	Adherence	90.66	99.94	WP_011227179
JNCNAFEI_1	1351199	1352068	rfbA	0.0	Capsule	Immune modulation	90.46	100.00	WP_011681286
JNCNAFEI_1	1176349	1177041	STR_RS05255	0.0	Capsule	Immune modulation	88.62	99.86	WP_011227247
JNCNAFEI_1	1176349	1177041	STU_RS14640	0.0	Capsule	Immune modulation	88.62	99.86	WP_011226047
JNCNAFEI_1	1534320	1535623	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
JNCNAFEI_1	1176349	1177041	STER_RS05310	0.0	Capsule	Immune modulation	87.46	99.86	WP_011681175
JNCNAFEI_1	230982	231992	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.36	99.80	WP_002986042
JNCNAFEI_1	1349289	1350335	rfbB	0.0	Capsule	Immune modulation	83.98	99.81	WP_002263087
JNCNAFEI_1	915917	916678	srtA	0.0	Sortase A	Exoenzyme	83.88	99.87	-
JNCNAFEI_1	2044154	2045437	tig/ropA	0.0	Trigger factor	Stress survival	80.68	99.61	WP_000107753
JNCNAFEI_1	1164517	1165100	SPD_RS01775	1.28e-146	Capsule	Immune modulation	83.08	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JNCNAFEI_1	913228	912254	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.31	99.09	AAK75326
JNCNAFEI_1	924811	925884	MntE	0.0	manganese homeostasis	95.81	99.72	ABF32167
JNCNAFEI_1	353254	350948	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
JNCNAFEI_1	770514	769033	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
JNCNAFEI_1	944352	946598	metE	0.0	methionine biosynthesis enzymes	93.19	100.00	AAK74738
JNCNAFEI_1	1626891	1625923	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
JNCNAFEI_1	2148519	2147548	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.36	100.00	ABF36968
JNCNAFEI_1	1377447	1375717	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
JNCNAFEI_1	490475	491626	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
JNCNAFEI_1	527341	529329	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
JNCNAFEI_1	13636	15114	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
JNCNAFEI_1	1535623	1534322	Eno	0.0	enolase	86.44	99.77	ABP90468
JNCNAFEI_1	28984	30876	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.42	98.90	ABP91129
JNCNAFEI_1	949520	947811	PGM	0.0	phosphoglucomutase	84.94	99.65	ACH87041
JNCNAFEI_1	2110878	2109787	recA	0.0	DNA recombination and repair	84.37	95.36	AAL00560
JNCNAFEI_1	177145	176135	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
JNCNAFEI_1	1083296	1081935	mnmE	0.0	central tRNA-modifying GTPase	82.46	99.56	ABP90420
JNCNAFEI_1	1550041	1549151	bglB	2.70e-177	putative phospho--glucosidase	87.88	99.66	AAK33487
JNCNAFEI_1	988843	987893	SP_0676	6.49e-169	transcription facot	81.39	98.45	AAK74821
JNCNAFEI_1	946788	947645	metF	9.41e-168	methionine biosynthesis enzymes	87.06	99.31	AAK74739
JNCNAFEI_1	830274	830945	rr01	4.66e-126	response regulator	84.82	99.56	CAB54566
JNCNAFEI_1	1224919	1224215	covR	9.68e-126	responder protein	85.53	100.00	AAK71319
JNCNAFEI_1	953487	954158	ciaR	2.08e-124	two component system response regulator	86.16	99.12	AIK75708
JNCNAFEI_1	953487	954155	CiaR	3.85e-124	two-component response regulator	87.44	99.55	AAK74935
JNCNAFEI_1	1224919	1224215	walR	2.20e-119	DNA-binding response regulator	82.13	100.00	ANC99504
JNCNAFEI_1	1878821	1878135	CovR	4.75e-119	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
JNCNAFEI_1	2109614	2109219	SpxA2	2.14e-74	transcriptional regulator	91.67	100.00	ERL21461
JNCNAFEI_1	1094759	1095160	SpxA1	7.65e-69	transcriptional regulator	82.09	100.00	ERL19273
JNCNAFEI_1	2059500	2059087	GrpE	1.69e-66	protein grpE	81.88	80.59	ABP89267
JNCNAFEI_1	2043987	2043496	RopE (M5005_Spy_1611)	1.05e-71	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
JNCNAFEI_1	353254	350954	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
JNCNAFEI_1	140457	141476	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451