Genome ID:GCA_046537695.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1277.35

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
BADKFEOJ_235982860877clbAARO:3002814clbA100.00100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
BADKFEOJ_235984260877cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
BADKFEOJ_235983160877clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAEXACTX100.00100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
BADKFEOJ_212853529716capB0.0CapsuleImmune modulation81.8799.66NP_391471
BADKFEOJ_212807128520capC9.11e-115CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BADKFEOJ_42808426948tufA0.0elongation factor Tu86.8195.69AHM69299
BADKFEOJ_101245011581pdxS1.35e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
BADKFEOJ_11996967996191CodY1.32e-124nutrient-responsive regulator81.08100.00ACJ80679
BADKFEOJ_17248037247645spxA19.72e-70redox-responsive transcription factor83.21100.00AAF21893
BADKFEOJ_237839678199CspA1.15e-31cold shock protein90.91100.00CAA62903
BADKFEOJ_54250942315CspB1.17e-27cold shock protein84.6198.48CAD00094
BADKFEOJ_237839678202CspR1.50e-26cold shock protein80.0098.48AAO82613
BADKFEOJ_64493844066lipA (SAUSA300_0829)1.77e-163lipoic acid synthetase80.8295.41ABD22039