Genome ID:GCA_046588145.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1010916.76

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IELDDGJM_56145383146822lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
IELDDGJM_67100058100375ykkDARO:3003064ykkD98.10100.00AL009126.1
IELDDGJM_11199820100989bmrARO:3003007bmr98.97100.00M33768.1
IELDDGJM_6799720100058ykkCARO:3003063ykkC99.11100.00AL009126.1
IELDDGJM_4048457415Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
IELDDGJM_912191073aadKARO:3002627aadK97.89100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IELDDGJM_2827984174tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.35100.00X08034
IELDDGJM_912211073aadKStreptomycin98.5999.77M26879
IELDDGJM_56119096120015mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IELDDGJM_2827984171tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_003242953.1
IELDDGJM_912221073aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
IELDDGJM_364460546245vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.62100.00WP_003234144.1
IELDDGJM_2861556673satAstreptothricin N-acetyltransferase SatABLASTX92.49100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IELDDGJM_5732094390capB0.0CapsuleImmune modulation99.66100.00NP_391471
IELDDGJM_5715842726capA0.0CapsuleImmune modulation99.65100.00NP_391469
IELDDGJM_5727453194capC0.0CapsuleImmune modulation99.56100.00NP_391470
IELDDGJM_892131922104dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
IELDDGJM_6114253188dep/capD0.0CapsuleImmune modulation99.26100.00NP_389723
IELDDGJM_892596033096dhbF0.0BacillibactinNutritional/Metabolic factor98.95100.00NP_391076
IELDDGJM_892213023326dhbC0.0BacillibactinNutritional/Metabolic factor98.75100.00NP_391079
IELDDGJM_892500225940dhbB0.0BacillibactinNutritional/Metabolic factor98.62100.00NP_391077
IELDDGJM_892335524974dhbE0.0BacillibactinNutritional/Metabolic factor97.90100.00NP_391078
IELDDGJM_29770398344hlyIII0.0Hemolysin IIIExotoxin97.82100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IELDDGJM_353165432790tufA0.0elongation factor Tu85.7595.69AHM69299
IELDDGJM_791112110252pdxS1.92e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
IELDDGJM_34115611114835CodY2.01e-125nutrient-responsive regulator81.08100.00ACJ80679
IELDDGJM_1161037161606ClpP1.87e-99part of proteolytic complex81.0597.44BAB94595
IELDDGJM_373863138239spxA13.72e-71redox-responsive transcription factor83.97100.00AAF21893
IELDDGJM_373863138239spx2.22e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
IELDDGJM_412051220754SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
IELDDGJM_851078310980CspA4.81e-33cold shock protein90.91100.00CAA62903
IELDDGJM_28574285548CspD6.46e-29cold shock protein81.5498.48CAC99957
IELDDGJM_451304512851CspB1.87e-27cold shock protein83.0898.48CAD00094