Genome ID:GCA_046591695.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GPIDLDNF_2541570542772bltARO:3003006blt99.50100.00L32599.1
GPIDLDNF_3506563506901ykkCARO:3003063ykkC100.00100.00AL009126.1
GPIDLDNF_3506246506563ykkDARO:3003064ykkD99.05100.00AL009126.1
GPIDLDNF_2353372354541bmrARO:3003007bmr99.74100.00M33768.1
GPIDLDNF_5191628193274vmlRARO:3004476vmlR98.91100.18NC_000964.3
GPIDLDNF_6109584110504mphKARO:3004541mphK98.68100.00CP010314.1
GPIDLDNF_69625097689lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
GPIDLDNF_64660047193tmrBARO:3003059tmrB98.48100.00AL009126.3
GPIDLDNF_42718729757Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GPIDLDNF_6109584110504mph(K)Spiramycin, Telithromycin99.02100.00NC_000964
GPIDLDNF_2560093560964aadKStreptomycin96.90100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GPIDLDNF_5191631193274vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
GPIDLDNF_6109596110504mphKmacrolide 2'-phosphotransferase MphKBLASTX98.6899.02WP_003246254.1
GPIDLDNF_2560096560806aadKaminoglycoside 6-adenylyltransferase AadKPARTIALX98.3183.45WP_003229862.1
GPIDLDNF_110637701064288satAstreptothricin N-acetyltransferase SatABLASTX92.49100.00WP_003242546.1
GPIDLDNF_25479857395rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.71100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GPIDLDNF_2152635153276hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
GPIDLDNF_1109059109997dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
GPIDLDNF_1575715576896capB0.0CapsuleImmune modulation99.58100.00NP_391471
GPIDLDNF_1112895113680dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
GPIDLDNF_2902710790dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
GPIDLDNF_1111673112869dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
GPIDLDNF_1575251575700capC0.0CapsuleImmune modulation98.89100.00NP_391470
GPIDLDNF_1101903109039dhbF0.0BacillibactinNutritional/Metabolic factor98.80100.00NP_391076
GPIDLDNF_1574090575232capA0.0CapsuleImmune modulation98.69100.00NP_391469
GPIDLDNF_1110025111644dhbE0.0BacillibactinNutritional/Metabolic factor97.53100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GPIDLDNF_92797026834tufA0.0elongation factor Tu84.9695.69AHM69299
GPIDLDNF_121111410245pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GPIDLDNF_3195161194385CodY7.62e-125nutrient-responsive regulator81.08100.00ACJ80679
GPIDLDNF_1413477414046ClpP6.65e-99part of proteolytic complex81.0597.44BAB94595
GPIDLDNF_3664815664423spxA15.99e-70redox-responsive transcription factor83.97100.00AAF21893
GPIDLDNF_3664815664423spx3.57e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GPIDLDNF_102049720739SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
GPIDLDNF_5145302145499CspA9.60e-32cold shock protein90.91100.00CAA62903