Genome ID:GCA_046840395.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 4 | 15.39 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IOGKIPFI_1 | 2552523 | 2553377 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| IOGKIPFI_1 | 2534035 | 2535237 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| IOGKIPFI_1 | 2348443 | 2349612 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| IOGKIPFI_1 | 1420622 | 1420939 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| IOGKIPFI_1 | 1420284 | 1420622 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| IOGKIPFI_1 | 936856 | 939426 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| IOGKIPFI_1 | 608300 | 609946 | vmlR | ARO:3004476 | vmlR | 97.99 | 100.18 | NC_000964.3 |
| IOGKIPFI_1 | 336887 | 337480 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| IOGKIPFI_1 | 287434 | 288867 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| IOGKIPFI_1 | 274619 | 275539 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IOGKIPFI_1 | 2552523 | 2553377 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| IOGKIPFI_1 | 274619 | 275539 | mph(K) | Spiramycin, Telithromycin | 97.94 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IOGKIPFI_1 | 274619 | 275527 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| IOGKIPFI_1 | 2552526 | 2553377 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| IOGKIPFI_1 | 608303 | 609946 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 97.99 | 100.00 | WP_003234144.1 |
| IOGKIPFI_1 | 4077917 | 4078435 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IOGKIPFI_1 | 3103087 | 3104025 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| IOGKIPFI_1 | 3567827 | 3569008 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| IOGKIPFI_1 | 3106912 | 3107697 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| IOGKIPFI_1 | 3566202 | 3567344 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| IOGKIPFI_1 | 3095931 | 3103067 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.12 | 100.00 | NP_391076 |
| IOGKIPFI_1 | 1964267 | 1966030 | dep/capD | 0.0 | Capsule | Immune modulation | 98.92 | 100.00 | NP_389723 |
| IOGKIPFI_1 | 2131416 | 2132057 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| IOGKIPFI_1 | 3567363 | 3567812 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| IOGKIPFI_1 | 3105690 | 3106886 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| IOGKIPFI_1 | 3104053 | 3105672 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.84 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IOGKIPFI_1 | 133188 | 134324 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IOGKIPFI_1 | 19212 | 20081 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IOGKIPFI_1 | 1741567 | 1742343 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IOGKIPFI_1 | 3414916 | 3415485 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |