Genome ID:GCA_046938415.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2012.24

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ADCGFEAG_5363298248tet(W)ARO:3000194tet(W)92.63100.00AJ222769.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ADCGFEAG_5384279803tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.49100.00AY081910
ADCGFEAG_5363298233tet(O/W/O)-2Doxycycline, Tetracycline, Minocycline89.2699.01AY196920
ADCGFEAG_11934515erm(T)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.5965.31AJ488494
ADCGFEAG_1209515erm(B)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S98.8266.40X66468

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ADCGFEAG_5384279800tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_002294500.1
ADCGFEAG_5363298242tet(W)tetracycline resistance ribosomal protection protein Tet(W)BLASTX94.6799.84WP_003672618.1
ADCGFEAG_12034513erm(B)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)PARTIAL_CONTIG_ENDX100.0065.31WP_001038795.1
ADCGFEAG_11934513erm(T)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)PARTIAL_CONTIG_ENDX98.7565.31WP_011100845.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ADCGFEAG_74176841962CspA9.71e-29cold shock protein84.6198.48CAA62903