Genome ID:GCA_047302535.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PMNALKBO_1 | 2458743 | 2459597 | aadK | ARO:3002627 | aadK | 97.89 | 100.00 | AL009126.1 |
| PMNALKBO_1 | 2429161 | 2430363 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| PMNALKBO_1 | 2244392 | 2245561 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| PMNALKBO_1 | 1186624 | 1186941 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| PMNALKBO_1 | 1186286 | 1186624 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| PMNALKBO_1 | 720807 | 723377 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| PMNALKBO_1 | 434142 | 435770 | vmlR | ARO:3004476 | vmlR | 98.15 | 99.09 | NC_000964.3 |
| PMNALKBO_1 | 177390 | 177983 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| PMNALKBO_1 | 126844 | 128277 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| PMNALKBO_1 | 114029 | 114949 | mphK | ARO:3004541 | mphK | 99.01 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PMNALKBO_1 | 114029 | 114949 | mph(K) | Spiramycin, Telithromycin | 99.02 | 100.00 | NC_000964 |
| PMNALKBO_1 | 2458743 | 2459597 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
| PMNALKBO_1 | 3929424 | 3930800 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.47 | 100.00 | D12567 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PMNALKBO_1 | 114029 | 114937 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.01 | 99.02 | WP_003246254.1 |
| PMNALKBO_1 | 3929427 | 3930800 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_063856081.1 |
| PMNALKBO_1 | 434145 | 435770 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.15 | 98.90 | WP_003234144.1 |
| PMNALKBO_1 | 2458746 | 2459597 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.89 | 100.00 | WP_003229862.1 |
| PMNALKBO_1 | 3926874 | 3927392 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| PMNALKBO_1 | 1945467 | 1948064 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.71 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PMNALKBO_1 | 3016274 | 3017059 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.87 | 100.00 | NP_391080 |
| PMNALKBO_1 | 3428166 | 3429347 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| PMNALKBO_1 | 3012438 | 3013376 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| PMNALKBO_1 | 2044215 | 2044856 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| PMNALKBO_1 | 3426541 | 3427683 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| PMNALKBO_1 | 3005282 | 3012418 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.27 | 100.00 | NP_391076 |
| PMNALKBO_1 | 3427702 | 3428151 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| PMNALKBO_1 | 3015052 | 3016248 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| PMNALKBO_1 | 1896168 | 1897931 | dep/capD | 0.0 | Capsule | Immune modulation | 98.75 | 100.00 | NP_389723 |
| PMNALKBO_1 | 3013404 | 3015023 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.33 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PMNALKBO_1 | 4090070 | 4091206 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| PMNALKBO_1 | 3976338 | 3977207 | pdxS | 3.06e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| PMNALKBO_1 | 1500090 | 1500866 | CodY | 3.34e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| PMNALKBO_1 | 3271437 | 3272006 | ClpP | 2.48e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |