Genome ID:GCA_047314825.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DNFCPGEP_1288969289823aadKARO:3002627aadK88.38100.00AL009126.1
DNFCPGEP_11113810114127ykkDARO:3003064ykkD98.10100.00AL009126.1
DNFCPGEP_11113472113810ykkCARO:3003063ykkC97.32100.00AL009126.1
DNFCPGEP_18076481933bmrARO:3003007bmr99.74100.00M33768.1
DNFCPGEP_74804449483lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
DNFCPGEP_132943131077vmlRARO:3004476vmlR98.54100.18NC_000964.3
DNFCPGEP_431244713649bltARO:3003006blt99.50100.00L32599.1
DNFCPGEP_3578598713aadKARO:3002627aadK98.59100.00AL009126.1
DNFCPGEP_710481641tmrBARO:3003059tmrB96.95100.00AL009126.3
DNFCPGEP_471282698Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DNFCPGEP_107994281318tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.35100.00X08034
DNFCPGEP_3578598713aadKStreptomycin98.83100.00M26879
DNFCPGEP_77483775756mph(K)Spiramycin, Telithromycin97.8399.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DNFCPGEP_107994581318tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_003242953.1
DNFCPGEP_3578628713aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
DNFCPGEP_132943131074vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
DNFCPGEP_107744377961satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
DNFCPGEP_1288972289823aadKaminoglycoside 6-adenylyltransferase AadKBLASTX88.38100.00WP_003229862.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DNFCPGEP_1299770100708dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
DNFCPGEP_12103595104380dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
DNFCPGEP_3828713320capC0.0CapsuleImmune modulation99.56100.00NP_391470
DNFCPGEP_243365234293hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
DNFCPGEP_3833354516capB0.0CapsuleImmune modulation99.41100.00NP_391471
DNFCPGEP_3817102852capA0.0CapsuleImmune modulation99.30100.00NP_391469
DNFCPGEP_55913460897dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
DNFCPGEP_129261499750dhbF0.0BacillibactinNutritional/Metabolic factor98.95100.00NP_391076
DNFCPGEP_12102373103569dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
DNFCPGEP_12100736102355dhbE0.0BacillibactinNutritional/Metabolic factor97.84100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DNFCPGEP_263176732903tufA0.0elongation factor Tu85.7595.69AHM69299
DNFCPGEP_4844185287pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
DNFCPGEP_3196813196037CodY1.75e-125nutrient-responsive regulator81.08100.00ACJ80679
DNFCPGEP_4153612153043ClpP1.24e-99part of proteolytic complex81.0597.44BAB94595
DNFCPGEP_205297353365spxA15.22e-71redox-responsive transcription factor83.97100.00AAF21893
DNFCPGEP_205297353365spx3.11e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
DNFCPGEP_292063320875SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
DNFCPGEP_138335283155CspA4.53e-32cold shock protein90.91100.00CAA62903
DNFCPGEP_242241922225CspD1.72e-28cold shock protein80.0098.48CAC99957
DNFCPGEP_242241922222CspB3.56e-28cold shock protein80.30100.00CAD00094