Genome ID：GCA_047460855.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
5	16	35	38.81

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
JJPBDDGL_32	4031	4768	ErmB	ARO:3000375	ErmB	98.37	98.79	AF242872.1
JJPBDDGL_39	1354	2961	tet(M)	ARO:3000186	tet(M)	94.91	83.72	AB039845.1
JJPBDDGL_43	2	1711	tet(M)	ARO:3000186	tet(M)	99.30	89.20	AB039845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JJPBDDGL_32	4031	4768	erm(B)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	JN899585
JJPBDDGL_40	1107	2324	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
JJPBDDGL_40	2444	3513	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	73.09	AF274302
JJPBDDGL_39	1354	3272	tet(M)	Doxycycline, Tetracycline, Minocycline	99.79	99.95	X04388

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JJPBDDGL_32	4034	4768	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	EXACTX	100.00	100.00	WP_002321849.1
JJPBDDGL_40	1107	2321	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
JJPBDDGL_43	2	1711	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	PARTIAL_CONTIG_ENDX	100.00	89.20	WP_000691727.1
JJPBDDGL_39	1354	2943	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	PARTIALX	100.00	82.94	WP_002414694.1
JJPBDDGL_40	2444	3511	msr(D)	ABC-F type ribosomal protection protein Msr(D)	PARTIAL_CONTIG_ENDX	100.00	73.10	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JJPBDDGL_4	98780	99631	rfbD	0.0	Capsule	Immune modulation	94.95	100.00	WP_014621820
JJPBDDGL_1	326128	327495	STU_RS14630	0.0	Capsule	Immune modulation	94.01	100.00	WP_011226045
JJPBDDGL_1	322429	323889	STER_RS05320	0.0	Capsule	Immune modulation	93.98	100.00	WP_011681177
JJPBDDGL_1	322429	323889	STU_RS14650	0.0	Capsule	Immune modulation	93.84	100.14	WP_011226049
JJPBDDGL_1	326128	327493	STER_RS05300	0.0	Capsule	Immune modulation	93.70	99.85	WP_011681173
JJPBDDGL_1	325332	326072	STER_RS05305	0.0	Capsule	Immune modulation	93.52	100.00	WP_011681174
JJPBDDGL_1	322429	323889	STR_RS05265	0.0	Capsule	Immune modulation	93.22	100.14	WP_041827043
JJPBDDGL_1	325332	326072	STU_RS14635	0.0	Capsule	Immune modulation	92.98	100.00	WP_011226046
JJPBDDGL_1	325332	326067	STR_RS05250	0.0	Capsule	Immune modulation	92.53	98.13	WP_011227246
JJPBDDGL_1	323890	324621	STU_RS14645	0.0	Capsule	Immune modulation	92.35	100.00	WP_011226048
JJPBDDGL_1	323890	324621	STER_RS05315	0.0	Capsule	Immune modulation	91.67	100.00	WP_011681176
JJPBDDGL_1	148237	148830	STR_RS05880	0.0	Capsule	Immune modulation	91.41	100.00	WP_011226149
JJPBDDGL_1	323890	324621	STR_RS05260	0.0	Capsule	Immune modulation	91.39	100.00	WP_011227248
JJPBDDGL_1	147368	148237	rfbA	0.0	Capsule	Immune modulation	91.38	100.00	WP_011681286
JJPBDDGL_1	148237	148830	STER_RS06030	0.0	Capsule	Immune modulation	91.25	100.00	WP_011226149
JJPBDDGL_1	148237	148830	STU_RS15260	0.0	Capsule	Immune modulation	91.25	100.00	WP_011226149
JJPBDDGL_22	17393	18232	cbpD	0.0	Autolysin	Exoenzyme	91.07	100.00	WP_011226733
JJPBDDGL_1	430854	432512	fbp54	0.0	FBPs	Adherence	90.84	99.94	WP_011227179
JJPBDDGL_1	324630	325322	STR_RS05255	0.0	Capsule	Immune modulation	88.62	99.86	WP_011227247
JJPBDDGL_1	324630	325322	STU_RS14640	0.0	Capsule	Immune modulation	88.62	99.86	WP_011226047
JJPBDDGL_5	87759	89062	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
JJPBDDGL_25	14440	15450	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.46	99.80	WP_002986042
JJPBDDGL_1	324630	325322	STER_RS05310	0.0	Capsule	Immune modulation	86.89	99.86	WP_011681175
JJPBDDGL_10	17754	18515	srtA	0.0	Sortase A	Exoenzyme	84.67	99.87	-
JJPBDDGL_1	149216	150262	rfbB	0.0	Capsule	Immune modulation	81.51	99.90	WP_009659423
JJPBDDGL_12	91009	92292	tig/ropA	0.0	Trigger factor	Stress survival	80.68	99.61	WP_000107753
JJPBDDGL_1	336652	337237	SPD_RS01775	4.68e-140	Capsule	Immune modulation	82.28	96.53	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JJPBDDGL_10	15064	14081	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.95	100.00	AAK75326
JJPBDDGL_10	26648	27721	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
JJPBDDGL_3	12591	10285	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.54	99.22	AAK74619
JJPBDDGL_10	45705	47951	metE	0.0	methionine biosynthesis enzymes	93.59	100.00	AAK74738
JJPBDDGL_14	15293	14325	spr0084	0.0	pathogenitcity related	93.50	98.48	AAK98888
JJPBDDGL_6	68732	67251	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
JJPBDDGL_34	4375	5346	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.36	100.00	ABF36968
JJPBDDGL_1	121990	123720	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
JJPBDDGL_3	157219	158370	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
JJPBDDGL_4	113363	111375	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
JJPBDDGL_9	25881	27359	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
JJPBDDGL_5	87759	89060	Eno	0.0	enolase	86.44	99.77	ABP90468
JJPBDDGL_9	41239	43131	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
JJPBDDGL_10	50873	49164	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
JJPBDDGL_38	1958	867	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
JJPBDDGL_26	1992	982	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
JJPBDDGL_1	417347	418708	mnmE	0.0	central tRNA-modifying GTPase	82.89	99.56	ABP90420
JJPBDDGL_5	73353	74243	bglB	6.98e-178	putative phospho--glucosidase	87.54	99.66	AAK33487
JJPBDDGL_10	90240	89290	SP_0676	2.85e-170	transcription facot	81.39	98.45	AAK74821
JJPBDDGL_10	48141	48998	metF	4.25e-169	methionine biosynthesis enzymes	87.06	99.31	AAK74739
JJPBDDGL_8	39530	40210	NisR	5.25e-133	two-component signal-transduction systems	94.71	100.00	ABP89873
JJPBDDGL_8	40198	40902	NisK	2.27e-131	two-component signal-transduction systems	91.06	100.00	ABP89872
JJPBDDGL_15	50388	49717	rr01	1.00e-127	response regulator	84.82	99.56	CAB54566
JJPBDDGL_1	277625	278329	covR	2.33e-127	responder protein	85.96	100.00	AAK71319
JJPBDDGL_10	54841	55512	ciaR	7.05e-127	two component system response regulator	86.61	99.12	AIK75708
JJPBDDGL_10	54841	55503	CiaR	2.80e-125	two-component response regulator	88.23	98.66	AAK74935
JJPBDDGL_7	55456	54770	CovR	2.42e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
JJPBDDGL_1	277625	278329	walR	4.24e-120	DNA-binding response regulator	82.13	100.00	ANC99504
JJPBDDGL_38	694	299	SpxA2	4.57e-77	transcriptional regulator	91.67	100.00	ERL21461
JJPBDDGL_1	405882	405481	SpxA1	9.63e-70	transcriptional regulator	82.84	100.00	ERL19273
JJPBDDGL_27	6057	5644	GrpE	1.23e-68	protein grpE	81.88	80.59	ABP89267
JJPBDDGL_7	32248	31961	spr0479	2.35e-48	essential gene	85.42	98.97	AAK99283
JJPBDDGL_2	42421	42167	spr1327	8.45e-45	essential gene	92.94	100.00	AAL00131
JJPBDDGL_20	28448	28711	spr0175	1.86e-43	pathogenitcity related	85.23	100.00	AAK98979
JJPBDDGL_20	29273	29539	spr0177	4.12e-42	essential gene	83.15	88.12	AAK98981
JJPBDDGL_12	90842	90351	RopE (M5005_Spy_1611)	4.54e-73	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
JJPBDDGL_3	12591	10291	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.22	98.08	MYN69560
JJPBDDGL_13	34560	33541	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451