Genome ID:GCA_047780285.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1277.35

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EHHMHPKN_445835259401clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EHHMHPKN_445836659401cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0998.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EHHMHPKN_445835559401clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
EHHMHPKN_332863429815capB0.0CapsuleImmune modulation81.7999.66NP_391471
EHHMHPKN_332817028619capC9.05e-118CapsuleImmune modulation84.0399.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EHHMHPKN_643177132907tufA0.0elongation factor Tu86.8195.69AHM69299
EHHMHPKN_543945263pdxS1.37e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
EHHMHPKN_1113657241364948CodY1.79e-124nutrient-responsive regulator81.08100.00ACJ80679
EHHMHPKN_12321623608spxA11.28e-70redox-responsive transcription factor83.21100.00AAF21893
EHHMHPKN_447031070113CspA7.63e-31cold shock protein89.39100.00CAA62903
EHHMHPKN_614123241038CspB4.85e-27cold shock protein84.6198.48CAD00094
EHHMHPKN_22131247130375lipA (SAUSA300_0829)1.78e-162lipoic acid synthetase80.8295.41ABD22039