Genome ID:GCA_049059625.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 9 | 18.71 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGLMPPEH_2 | 622117 | 622455 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IGLMPPEH_2 | 621800 | 622117 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| IGLMPPEH_6 | 277041 | 279611 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| IGLMPPEH_1 | 237601 | 238770 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IGLMPPEH_10 | 162235 | 162828 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| IGLMPPEH_10 | 111757 | 113196 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.42 | JYFL01000006.1 |
| IGLMPPEH_10 | 98943 | 99863 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| IGLMPPEH_7 | 32960 | 33814 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| IGLMPPEH_4 | 28992 | 30635 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.00 | NC_000964.3 |
| IGLMPPEH_7 | 14299 | 15501 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IGLMPPEH_11 | 36212 | 37588 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.84 | 100.00 | X08034 |
| IGLMPPEH_7 | 32962 | 33814 | aadK | Streptomycin | 98.71 | 99.77 | M26879 |
| IGLMPPEH_10 | 98943 | 99863 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGLMPPEH_11 | 36212 | 37585 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_003242953.1 |
| IGLMPPEH_4 | 28992 | 30632 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| IGLMPPEH_7 | 32963 | 33814 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| IGLMPPEH_10 | 98943 | 99860 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| IGLMPPEH_11 | 39541 | 40059 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| IGLMPPEH_22 | 57415 | 60012 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.60 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IGLMPPEH_1 | 36155 | 36796 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| IGLMPPEH_8 | 250224 | 251162 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| IGLMPPEH_11 | 520978 | 522159 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| IGLMPPEH_8 | 248577 | 250196 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.26 | 100.00 | NP_391078 |
| IGLMPPEH_8 | 246541 | 247326 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391080 |
| IGLMPPEH_11 | 522642 | 523784 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| IGLMPPEH_8 | 247352 | 248548 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| IGLMPPEH_22 | 105180 | 106943 | dep/capD | 0.0 | Capsule | Immune modulation | 98.87 | 100.00 | NP_389723 |
| IGLMPPEH_8 | 251182 | 258318 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.82 | 100.00 | NP_391076 |
| IGLMPPEH_11 | 522174 | 522623 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IGLMPPEH_18 | 27942 | 26806 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IGLMPPEH_20 | 11190 | 10321 | pdxS | 1.10e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IGLMPPEH_2 | 312255 | 311479 | CodY | 5.38e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IGLMPPEH_11 | 663576 | 663007 | ClpP | 4.30e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| IGLMPPEH_9 | 109894 | 109502 | spxA1 | 2.46e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| IGLMPPEH_9 | 109894 | 109502 | spx | 1.47e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| IGLMPPEH_15 | 20508 | 20750 | SpoVG | 7.48e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| IGLMPPEH_4 | 77366 | 77169 | CspA | 9.25e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| IGLMPPEH_1 | 48758 | 48952 | CspD | 2.41e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| IGLMPPEH_9 | 353142 | 353336 | CspB | 3.55e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |