Genome ID:GCA_049200355.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IKADCFDG_1 | 2555441 | 2556295 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| IKADCFDG_1 | 2537069 | 2538271 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| IKADCFDG_1 | 2340186 | 2341355 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IKADCFDG_1 | 1353652 | 1353969 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| IKADCFDG_1 | 1353314 | 1353652 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IKADCFDG_1 | 884802 | 887372 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| IKADCFDG_1 | 590496 | 592139 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| IKADCFDG_1 | 340060 | 340653 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| IKADCFDG_1 | 289562 | 290995 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| IKADCFDG_1 | 276749 | 277669 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IKADCFDG_1 | 4018378 | 4019754 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.91 | 100.00 | D12567 |
| IKADCFDG_1 | 2555443 | 2556295 | aadK | Streptomycin | 98.71 | 99.77 | M26879 |
| IKADCFDG_1 | 276749 | 277669 | mph(K) | Spiramycin, Telithromycin | 98.48 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IKADCFDG_1 | 4018381 | 4019754 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_063856081.1 |
| IKADCFDG_1 | 276749 | 277666 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| IKADCFDG_1 | 590499 | 592139 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| IKADCFDG_1 | 2555444 | 2556295 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| IKADCFDG_1 | 4015907 | 4016425 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| IKADCFDG_1 | 2032376 | 2034973 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.83 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IKADCFDG_1 | 3107587 | 3108525 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.89 | 100.00 | NP_391077 |
| IKADCFDG_1 | 3100431 | 3107567 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.78 | 100.00 | NP_391076 |
| IKADCFDG_1 | 3527003 | 3528184 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| IKADCFDG_1 | 3111423 | 3112208 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| IKADCFDG_1 | 3108553 | 3110172 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.44 | 100.00 | NP_391078 |
| IKADCFDG_1 | 3110201 | 3111397 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.42 | 100.00 | NP_391079 |
| IKADCFDG_1 | 1981846 | 1983609 | dep/capD | 0.0 | Capsule | Immune modulation | 99.38 | 100.00 | NP_389723 |
| IKADCFDG_1 | 3526539 | 3526988 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| IKADCFDG_1 | 2140229 | 2140870 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.22 | 100.00 | NP_390062 |
| IKADCFDG_1 | 3525378 | 3526520 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IKADCFDG_1 | 132339 | 133475 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IKADCFDG_1 | 18604 | 19473 | pdxS | 3.01e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IKADCFDG_1 | 1666967 | 1667743 | CodY | 3.28e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IKADCFDG_1 | 3367800 | 3368369 | ClpP | 2.43e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |