Genome ID:GCA_049537795.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 2 | 6 | 6.40 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ADLOPBMB_1 | 720982 | 722358 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 87.44 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADLOPBMB_1 | 720988 | 722358 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 87.31 | 99.78 | WP_003242953.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ADLOPBMB_3 | 500239 | 501420 | capB | 0.0 | Capsule | Immune modulation | 82.46 | 99.66 | NP_391471 |
| ADLOPBMB_3 | 499775 | 500224 | capC | 7.79e-116 | Capsule | Immune modulation | 83.81 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ADLOPBMB_6 | 31770 | 32906 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| ADLOPBMB_8 | 12536 | 11667 | pdxS | 8.84e-153 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| ADLOPBMB_2 | 738394 | 739170 | CodY | 1.28e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ADLOPBMB_2 | 254203 | 254595 | spxA1 | 2.33e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| ADLOPBMB_4 | 324708 | 324905 | CspA | 2.29e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| ADLOPBMB_4 | 324708 | 324902 | CspR | 3.00e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| ADLOPBMB_3 | 131100 | 130228 | lipA (SAUSA300_0829) | 3.14e-162 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |