Genome ID：GCA_049538155.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LNKONGDC_3	237287	238141	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
LNKONGDC_3	218502	219704	blt	ARO:3003006	blt	100.00	100.00	L32599.1
LNKONGDC_10	166821	167159	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LNKONGDC_10	166504	166821	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LNKONGDC_2	110683	111603	mphK	ARO:3004541	mphK	99.35	100.00	CP010314.1
LNKONGDC_2	97350	98789	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
LNKONGDC_2	47641	48234	tmrB	ARO:3003059	tmrB	99.49	100.00	AL009126.3
LNKONGDC_6	29027	30673	vmlR	ARO:3004476	vmlR	98.91	100.18	NC_000964.3
LNKONGDC_4	27340	29910	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
LNKONGDC_3	20384	21553	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LNKONGDC_2	110683	111603	mph(K)	Spiramycin, Telithromycin	99.02	100.00	NC_000964
LNKONGDC_3	237289	238141	aadK	Streptomycin	98.83	99.77	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LNKONGDC_2	110686	111603	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.35	100.00	WP_003246254.1
LNKONGDC_6	29027	30670	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.91	100.00	WP_003234144.1
LNKONGDC_3	237290	238141	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
LNKONGDC_7	71439	71957	satA	streptothricin N-acetyltransferase SatA	BLASTX	91.33	100.00	WP_003242546.1
LNKONGDC_9	419309	421906	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.60	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LNKONGDC_9	517647	518288	hlyIII	0.0	Hemolysin III	Exotoxin	99.84	100.00	NP_390062
LNKONGDC_1	459288	466424	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391076
LNKONGDC_8	2854	3303	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
LNKONGDC_8	3318	4499	capB	0.0	Capsule	Immune modulation	99.49	100.00	NP_391471
LNKONGDC_1	454647	455432	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
LNKONGDC_8	1693	2835	capA	0.0	Capsule	Immune modulation	99.39	100.00	NP_391469
LNKONGDC_9	365454	367217	dep/capD	0.0	Capsule	Immune modulation	99.38	100.00	NP_389723
LNKONGDC_1	455458	456654	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.08	100.00	NP_391079
LNKONGDC_1	458330	459268	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.30	100.00	NP_391077
LNKONGDC_1	456683	458302	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.41	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LNKONGDC_12	27987	26851	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LNKONGDC_16	11174	10305	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LNKONGDC_9	144372	145148	CodY	5.75e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LNKONGDC_1	151023	150454	ClpP	3.42e-99	part of proteolytic complex	81.05	97.44	BAB94595
LNKONGDC_10	334580	334188	spxA1	3.89e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LNKONGDC_10	334580	334188	spx	2.32e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LNKONGDC_5	34692	34450	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
LNKONGDC_6	78819	78622	CspA	9.66e-32	cold shock protein	90.91	100.00	CAA62903
LNKONGDC_9	530248	530442	CspD	4.36e-28	cold shock protein	81.54	98.48	CAC99957
LNKONGDC_10	579325	579519	CspB	5.60e-27	cold shock protein	83.08	98.48	CAD00094