Genome ID:GCA_049706275.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 9 | 9 | 15.59 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGDDINPK_444 | 30970 | 31890 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| BGDDINPK_431 | 21809 | 23455 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| BGDDINPK_501 | 9435 | 12005 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| BGDDINPK_65 | 7577 | 8779 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| BGDDINPK_500 | 7049 | 8482 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| BGDDINPK_520 | 4728 | 5066 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| BGDDINPK_520 | 4411 | 4728 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BGDDINPK_128 | 3876 | 5252 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.13 | 100.00 | D12567 |
| BGDDINPK_444 | 30970 | 31890 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGDDINPK_128 | 3879 | 5252 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| BGDDINPK_444 | 30970 | 31878 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| BGDDINPK_431 | 21809 | 23452 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| BGDDINPK_128 | 1356 | 1874 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BGDDINPK_440 | 6736 | 7917 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| BGDDINPK_78 | 2839 | 3624 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| BGDDINPK_440 | 8400 | 9542 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| BGDDINPK_150 | 4858 | 5796 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| BGDDINPK_314 | 1504 | 3267 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| BGDDINPK_237 | 5905 | 6546 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| BGDDINPK_440 | 7932 | 8381 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| BGDDINPK_78 | 1617 | 2813 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.74 | 100.00 | NP_391079 |
| BGDDINPK_78 | 1 | 1588 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.42 | 98.02 | NP_391078 |
| BGDDINPK_150 | 1 | 4838 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 67.79 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BGDDINPK_462 | 10725 | 9589 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| BGDDINPK_97 | 729 | 1598 | pdxS | 8.49e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BGDDINPK_154 | 2238 | 1462 | CodY | 9.05e-128 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BGDDINPK_496 | 6052 | 5483 | ClpP | 4.68e-101 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| BGDDINPK_377 | 3025 | 3417 | spxA1 | 5.45e-72 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| BGDDINPK_377 | 3025 | 3417 | spx | 3.25e-70 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| BGDDINPK_367 | 6562 | 6320 | SpoVG | 3.68e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| BGDDINPK_51 | 5282 | 5479 | CspA | 2.69e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| BGDDINPK_398 | 3414 | 3608 | CspD | 2.32e-30 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| BGDDINPK_52 | 1308 | 1114 | CspB | 6.33e-29 | cold shock protein | 83.08 | 98.48 | CAD00094 |