Genome ID：GCA_900094135.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	28	29	40.31

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HPOFIPAE_1	43603	44442	cbpD	0.0	Autolysin	Exoenzyme	100.00	100.00	WP_011226733
HPOFIPAE_1	1243884	1244939	STU_RS16235	0.0	Capsule	Immune modulation	99.91	100.00	WP_002948022
HPOFIPAE_1	1242103	1243887	STU_RS16230	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226325
HPOFIPAE_1	939145	939624	STR_RS05225	0.0	Capsule	Immune modulation	99.79	100.00	WP_041827041
HPOFIPAE_1	1246957	1247913	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
HPOFIPAE_1	1246164	1246973	STU_RS16245	0.0	Capsule	Immune modulation	99.75	100.00	WP_002948020
HPOFIPAE_1	1247910	1249058	STU_RS16255	0.0	Capsule	Immune modulation	99.74	100.00	WP_041828290
HPOFIPAE_1	1244959	1246164	STU_RS16240	0.0	Capsule	Immune modulation	99.67	100.00	WP_011226326
HPOFIPAE_1	1056076	1056945	rfbA	0.0	Capsule	Immune modulation	99.66	100.00	WP_011681286
HPOFIPAE_1	1055483	1056076	STR_RS05880	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226149
HPOFIPAE_1	841291	842949	fbp54	0.0	FBPs	Adherence	99.40	100.00	WP_011227179
HPOFIPAE_1	1055483	1056076	STER_RS06030	0.0	Capsule	Immune modulation	99.33	100.00	WP_011226149
HPOFIPAE_1	1055483	1056076	STU_RS15260	0.0	Capsule	Immune modulation	99.33	100.00	WP_011226149
HPOFIPAE_1	938209	939139	STR_RS05220	0.0	Capsule	Immune modulation	99.25	95.49	WP_011227240
HPOFIPAE_1	932896	934317	STR_RS05200	0.0	Capsule	Immune modulation	99.23	100.00	WP_011227236
HPOFIPAE_1	1090841	1091602	srtA	0.0	Sortase A	Exoenzyme	99.08	100.00	-
HPOFIPAE_1	1251716	1252990	STU_RS16265	0.0	Capsule	Immune modulation	98.90	100.00	WP_011226331
HPOFIPAE_1	1010639	1011429	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.86	99.87	-
HPOFIPAE_1	1250754	1251716	STU_RS16260	0.0	Capsule	Immune modulation	98.86	95.25	WP_011226330
HPOFIPAE_1	944678	946132	STU_RS14650	0.0	Capsule	Immune modulation	98.69	100.00	WP_011226049
HPOFIPAE_1	944678	946132	STR_RS05265	0.0	Capsule	Immune modulation	98.42	100.00	WP_041827043
HPOFIPAE_1	1254093	1254944	rfbD	0.0	Capsule	Immune modulation	98.12	100.00	WP_014621820
HPOFIPAE_1	944678	946132	STER_RS05320	0.0	Capsule	Immune modulation	97.54	99.79	WP_011681177
HPOFIPAE_1	939646	940563	STR_RS05240	0.0	Capsule	Immune modulation	97.17	95.62	WP_041827042
HPOFIPAE_1	943946	944677	STU_RS14645	0.0	Capsule	Immune modulation	97.13	100.00	WP_011226048
HPOFIPAE_1	943946	944677	STER_RS05315	0.0	Capsule	Immune modulation	97.00	100.00	WP_011681176
HPOFIPAE_1	943245	943937	STR_RS05255	0.0	Capsule	Immune modulation	96.97	100.00	WP_011227247
HPOFIPAE_1	943245	943937	STU_RS14640	0.0	Capsule	Immune modulation	96.97	100.00	WP_011226047
HPOFIPAE_1	943946	944677	STR_RS05260	0.0	Capsule	Immune modulation	96.45	100.00	WP_011227248
HPOFIPAE_1	942498	943235	STER_RS05305	0.0	Capsule	Immune modulation	96.21	99.60	WP_011681174
HPOFIPAE_1	942500	943235	STR_RS05250	0.0	Capsule	Immune modulation	95.92	98.13	WP_011227246
HPOFIPAE_1	942498	943235	STU_RS14635	0.0	Capsule	Immune modulation	95.80	99.60	WP_011226046
HPOFIPAE_1	941070	942437	STU_RS14630	0.0	Capsule	Immune modulation	95.47	100.00	WP_011226045
HPOFIPAE_1	941072	942437	STER_RS05300	0.0	Capsule	Immune modulation	94.29	99.85	WP_011681173
HPOFIPAE_1	943245	943937	STER_RS05310	0.0	Capsule	Immune modulation	88.49	99.71	WP_011681175
HPOFIPAE_1	591276	592579	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
HPOFIPAE_1	1530247	1531257	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.02	99.51	WP_002986042
HPOFIPAE_1	136952	138235	tig/ropA	0.0	Trigger factor	Stress survival	80.58	99.77	WP_000107753
HPOFIPAE_1	1054007	1055053	rfbB	0.0	Capsule	Immune modulation	80.42	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HPOFIPAE_1	1094289	1095272	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
HPOFIPAE_1	696674	697747	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
HPOFIPAE_1	507648	508616	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
HPOFIPAE_1	1409872	1412175	pfl2(Sp_0459)	0.0	formate acetyltransferase	93.10	99.22	AAK74619
HPOFIPAE_1	1157914	1159395	SPD_0310	0.0	UPF0371 protein SPD_0310	92.11	100.00	ABJ54480
HPOFIPAE_1	717196	719442	metE	0.0	methionine biosynthesis enzymes	91.86	100.00	AAK74738
HPOFIPAE_1	27122	28093	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
HPOFIPAE_1	1296115	1294964	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
HPOFIPAE_1	1268112	1266124	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
HPOFIPAE_1	1078094	1076364	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.69	100.00	AAK34199
HPOFIPAE_1	1720760	1719282	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
HPOFIPAE_1	591276	592577	Eno	0.0	enolase	86.21	99.77	ABP90468
HPOFIPAE_1	1705564	1703672	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
HPOFIPAE_1	63239	64345	recA	0.0	DNA recombination and repair	84.91	95.36	AAL00560
HPOFIPAE_1	722367	720658	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
HPOFIPAE_1	1572227	1573237	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
HPOFIPAE_1	868302	866941	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
HPOFIPAE_1	1624239	1622347	PepO	0.0	endopeptidase	80.03	100.00	ABF32980
HPOFIPAE_1	576845	577735	bglB	1.24e-178	putative phospho--glucosidase	88.89	99.66	AAK33487
HPOFIPAE_1	781713	780775	SP_0676	7.68e-168	transcription facot	81.47	97.20	AAK74821
HPOFIPAE_1	719634	720491	metF	8.08e-165	methionine biosynthesis enzymes	86.36	99.31	AAK74739
HPOFIPAE_1	982959	982255	covR	3.27e-130	responder protein	84.68	100.00	AAK71319
HPOFIPAE_1	1138951	1138280	rr01	1.91e-125	response regulator	84.82	99.56	CAB54566
HPOFIPAE_1	726320	726988	CiaR	1.84e-120	two-component response regulator	86.10	99.55	AAK74935
HPOFIPAE_1	982959	982255	walR	2.35e-120	DNA-binding response regulator	80.85	100.00	ANC99504
HPOFIPAE_1	726320	726991	ciaR	2.28e-118	two component system response regulator	83.93	99.12	AIK75708
HPOFIPAE_1	293343	294029	CovR	9.40e-118	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
HPOFIPAE_1	64529	64903	SpxA2	1.08e-69	transcriptional regulator	91.20	94.70	ERL21461
HPOFIPAE_1	879660	880061	SpxA1	3.52e-66	transcriptional regulator	80.60	100.00	ERL19273
HPOFIPAE_1	138393	138893	RopE (M5005_Spy_1611)	4.60e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
HPOFIPAE_1	1409872	1412169	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.07	98.08	MYN69560
HPOFIPAE_1	1609781	1608762	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451