Genome ID：GCA_900110305.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CIDNJAAC_9	427543	427860	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
CIDNJAAC_9	427205	427543	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
CIDNJAAC_10	385042	386211	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
CIDNJAAC_13	323731	324651	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
CIDNJAAC_13	310398	311837	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
CIDNJAAC_4	293543	296113	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3
CIDNJAAC_13	260764	261357	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
CIDNJAAC_10	157855	159057	blt	ARO:3003006	blt	99.25	100.00	L32599.1
CIDNJAAC_10	139542	140396	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
CIDNJAAC_13	29353	30996	vmlR	ARO:3004476	vmlR	98.54	100.00	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CIDNJAAC_5	889010	890386	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.84	100.00	X08034
CIDNJAAC_10	139542	140394	aadK	Streptomycin	98.71	99.77	M26879
CIDNJAAC_13	323731	324651	mph(K)	Spiramycin, Telithromycin	97.72	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CIDNJAAC_5	889013	890386	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.69	100.00	WP_003242953.1
CIDNJAAC_13	29353	30993	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
CIDNJAAC_10	139542	140393	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
CIDNJAAC_13	323734	324651	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
CIDNJAAC_5	886536	887054	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
CIDNJAAC_8	184316	186913	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.60	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CIDNJAAC_5	7487	8425	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
CIDNJAAC_5	404241	405422	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
CIDNJAAC_8	280463	281104	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
CIDNJAAC_5	8453	10072	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.26	100.00	NP_391078
CIDNJAAC_5	11323	12108	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.24	100.00	NP_391080
CIDNJAAC_5	402616	403758	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
CIDNJAAC_5	10101	11297	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.91	100.00	NP_391079
CIDNJAAC_8	137375	139138	dep/capD	0.0	Capsule	Immune modulation	98.87	100.00	NP_389723
CIDNJAAC_5	331	7467	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.82	100.00	NP_391076
CIDNJAAC_5	403777	404226	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CIDNJAAC_17	31943	33079	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
CIDNJAAC_20	11466	10597	pdxS	1.15e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
CIDNJAAC_9	737489	738265	CodY	7.48e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
CIDNJAAC_5	262842	263411	ClpP	5.53e-99	part of proteolytic complex	81.05	97.44	BAB94595
CIDNJAAC_9	275761	276153	spxA1	5.88e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
CIDNJAAC_9	275761	276153	spx	3.51e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
CIDNJAAC_16	34890	34648	SpoVG	7.56e-39	RNA-binding protein	81.48	79.41	AAT02994
CIDNJAAC_13	77724	77527	CspA	1.83e-31	cold shock protein	90.91	100.00	CAA62903
CIDNJAAC_8	293029	293223	CspD	2.11e-28	cold shock protein	81.54	98.48	CAC99957