Genome ID:GCA_900156365.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 8 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MDBEBBNH_5 | 432241 | 432579 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MDBEBBNH_5 | 431924 | 432241 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MDBEBBNH_9 | 415166 | 416809 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.00 | NC_000964.3 |
| MDBEBBNH_6 | 373793 | 374962 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| MDBEBBNH_9 | 163598 | 164191 | tmrB | ARO:3003059 | tmrB | 98.98 | 100.00 | AL009126.3 |
| MDBEBBNH_9 | 113191 | 114630 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.42 | JYFL01000006.1 |
| MDBEBBNH_9 | 100389 | 101309 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| MDBEBBNH_10 | 47846 | 48700 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
| MDBEBBNH_10 | 28498 | 29700 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| MDBEBBNH_8 | 27360 | 29930 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MDBEBBNH_9 | 100389 | 101309 | mph(K) | Spiramycin, Telithromycin | 99.67 | 100.00 | NC_000964 |
| MDBEBBNH_10 | 47848 | 48700 | aadK | Streptomycin | 98.94 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MDBEBBNH_9 | 100389 | 101306 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| MDBEBBNH_10 | 47849 | 48700 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| MDBEBBNH_9 | 415169 | 416809 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| MDBEBBNH_14 | 44180 | 44698 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MDBEBBNH_14 | 528108 | 529289 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| MDBEBBNH_6 | 174583 | 175224 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| MDBEBBNH_14 | 937306 | 938091 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| MDBEBBNH_14 | 529772 | 530914 | capA | 0.0 | Capsule | Immune modulation | 99.39 | 100.00 | NP_391469 |
| MDBEBBNH_14 | 940989 | 941927 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| MDBEBBNH_14 | 529304 | 529753 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| MDBEBBNH_14 | 941947 | 949083 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.98 | 100.00 | NP_391076 |
| MDBEBBNH_14 | 938117 | 939313 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| MDBEBBNH_14 | 939342 | 940961 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.77 | 100.00 | NP_391078 |
| MDBEBBNH_6 | 9734 | 11497 | dep/capD | 0.0 | Capsule | Immune modulation | 98.70 | 100.00 | NP_389723 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDBEBBNH_12 | 31982 | 33118 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MDBEBBNH_7 | 4574 | 5443 | pdxS | 1.13e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MDBEBBNH_5 | 121975 | 121199 | CodY | 7.11e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MDBEBBNH_14 | 684097 | 683528 | ClpP | 6.32e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| MDBEBBNH_5 | 601132 | 600740 | spxA1 | 5.59e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| MDBEBBNH_5 | 601132 | 600740 | spx | 3.33e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| MDBEBBNH_15 | 34765 | 34523 | SpoVG | 7.55e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| MDBEBBNH_9 | 365513 | 365710 | CspA | 1.93e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MDBEBBNH_6 | 187189 | 187383 | CspD | 3.33e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |