Genome ID:GCA_900215365.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GKMCNJLD_12416716417054ykkCARO:3003063ykkC100.00100.00AL009126.1
GKMCNJLD_12416399416716ykkDARO:3003064ykkD99.05100.00AL009126.1
GKMCNJLD_11350337351983vmlRARO:3004476vmlR98.91100.18NC_000964.3
GKMCNJLD_10301892304462Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
GKMCNJLD_16294231295085aadKARO:3002627aadK98.59100.00AL009126.1
GKMCNJLD_16277138278340bltARO:3003006blt99.50100.00L32599.1
GKMCNJLD_119721997812tmrBARO:3003059tmrB100.00100.00AL009126.3
GKMCNJLD_165636757536bmrARO:3003007bmr99.49100.00M33768.1
GKMCNJLD_114674648179lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
GKMCNJLD_113393234852mphKARO:3004541mphK97.71100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GKMCNJLD_16294231295085aadKStreptomycin98.83100.00M26879
GKMCNJLD_9547261548637tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.33100.00D12567
GKMCNJLD_113393234852mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GKMCNJLD_11350340351983vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
GKMCNJLD_16294234295085aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
GKMCNJLD_9547264548637tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.47100.00WP_063856081.1
GKMCNJLD_113393234849mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
GKMCNJLD_9544772545290satAstreptothricin N-acetyltransferase SatABLASTX91.33100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GKMCNJLD_226160662247hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
GKMCNJLD_95103752218capB0.0CapsuleImmune modulation99.66100.00NP_391471
GKMCNJLD_14423407424192dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GKMCNJLD_14424218425414dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
GKMCNJLD_22220121221884dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
GKMCNJLD_94941250554capA0.0CapsuleImmune modulation98.69100.00NP_391469
GKMCNJLD_95057351022capC0.0CapsuleImmune modulation98.67100.00NP_391470
GKMCNJLD_14427090428028dhbB0.0BacillibactinNutritional/Metabolic factor98.40100.00NP_391077
GKMCNJLD_14428048435184dhbF0.0BacillibactinNutritional/Metabolic factor98.38100.00NP_391076
GKMCNJLD_14425443427062dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GKMCNJLD_181362812492tufA0.0elongation factor Tu84.9695.69AHM69299
GKMCNJLD_2145395408pdxS1.15e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GKMCNJLD_12107926107150CodY4.33e-125nutrient-responsive regulator81.08100.00ACJ80679
GKMCNJLD_14107366106797ClpP3.23e-99part of proteolytic complex81.0597.44BAB94595
GKMCNJLD_74635145959spxA12.06e-70redox-responsive transcription factor83.97100.00AAF21893
GKMCNJLD_74635145959spx1.23e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GKMCNJLD_201926719509SpoVG7.20e-38RNA-binding protein80.2579.41AAT02994
GKMCNJLD_11306564306761CspA1.65e-31cold shock protein90.91100.00CAA62903
GKMCNJLD_225037450180CspD5.93e-28cold shock protein80.0098.48CAC99957
GKMCNJLD_225037450177CspB1.23e-27cold shock protein80.30100.00CAD00094