Genome ID:GCA_903886075.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DPGBHBGB_1 | 1110232 | 1111101 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| DPGBHBGB_1 | 1109639 | 1110232 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| DPGBHBGB_1 | 1318776 | 1319585 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| DPGBHBGB_1 | 1109639 | 1110232 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| DPGBHBGB_1 | 1109639 | 1110232 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| DPGBHBGB_1 | 1319569 | 1320525 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226328 |
| DPGBHBGB_1 | 45027 | 45866 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| DPGBHBGB_1 | 1314715 | 1316499 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.44 | 100.00 | WP_011226325 |
| DPGBHBGB_1 | 883553 | 885211 | fbp54 | 0.0 | FBPs | Adherence | 99.34 | 100.00 | WP_011227179 |
| DPGBHBGB_1 | 1317571 | 1318776 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.25 | 100.00 | WP_011226326 |
| DPGBHBGB_1 | 1316496 | 1317551 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | WP_002948022 |
| DPGBHBGB_1 | 1326705 | 1327556 | rfbD | 0.0 | Capsule | Immune modulation | 99.06 | 100.00 | WP_014621820 |
| DPGBHBGB_1 | 988082 | 988813 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | WP_011681176 |
| DPGBHBGB_1 | 988082 | 988813 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| DPGBHBGB_1 | 1323366 | 1324328 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 98.65 | 95.25 | WP_011226330 |
| DPGBHBGB_1 | 988082 | 988813 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011227248 |
| DPGBHBGB_1 | 1320522 | 1321670 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 98.43 | 100.00 | WP_041828290 |
| DPGBHBGB_1 | 1054745 | 1055533 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.36 | 99.75 | - |
| DPGBHBGB_1 | 978140 | 979555 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 97.74 | 100.00 | WP_011681165 |
| DPGBHBGB_1 | 1146425 | 1147186 | srtA | 0.0 | Sortase A | Exoenzyme | 97.64 | 100.00 | - |
| DPGBHBGB_1 | 1324331 | 1325602 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.64 | 99.76 | WP_011226331 |
| DPGBHBGB_1 | 988814 | 990274 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.47 | 100.00 | WP_011681177 |
| DPGBHBGB_1 | 988814 | 990274 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 96.85 | 100.21 | WP_011226049 |
| DPGBHBGB_1 | 988814 | 990274 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 95.89 | 100.21 | WP_041827043 |
| DPGBHBGB_1 | 987381 | 988073 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011227247 |
| DPGBHBGB_1 | 987381 | 988073 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011226047 |
| DPGBHBGB_1 | 985191 | 986556 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 95.17 | 99.85 | WP_011681173 |
| DPGBHBGB_1 | 985189 | 986556 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 93.93 | 100.00 | WP_011226045 |
| DPGBHBGB_1 | 986613 | 987371 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 93.81 | 100.94 | WP_011681174 |
| DPGBHBGB_1 | 986613 | 987371 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 93.68 | 100.94 | WP_011226046 |
| DPGBHBGB_1 | 986618 | 987371 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 93.25 | 100.00 | WP_011227246 |
| DPGBHBGB_1 | 987381 | 988073 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011681175 |
| DPGBHBGB_1 | 606443 | 607746 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| DPGBHBGB_1 | 1613013 | 1614023 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.55 | 99.90 | WP_002986042 |
| DPGBHBGB_1 | 145344 | 146627 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| DPGBHBGB_1 | 1108164 | 1109210 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DPGBHBGB_1 | 1149873 | 1150856 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| DPGBHBGB_1 | 714267 | 715340 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| DPGBHBGB_1 | 522760 | 523728 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| DPGBHBGB_1 | 1491210 | 1493513 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| DPGBHBGB_1 | 1219782 | 1221263 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| DPGBHBGB_1 | 755241 | 757487 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| DPGBHBGB_1 | 65532 | 66524 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| DPGBHBGB_1 | 28544 | 29515 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| DPGBHBGB_1 | 1377417 | 1376266 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| DPGBHBGB_1 | 1340764 | 1338776 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.99 | 100.00 | AE014259_2 |
| DPGBHBGB_1 | 1133676 | 1131946 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| DPGBHBGB_1 | 1816960 | 1815482 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| DPGBHBGB_1 | 606443 | 607744 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| DPGBHBGB_1 | 1801770 | 1799878 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| DPGBHBGB_1 | 760412 | 758703 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| DPGBHBGB_1 | 1654992 | 1656002 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| DPGBHBGB_1 | 907268 | 905907 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| DPGBHBGB_1 | 1705258 | 1703366 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| DPGBHBGB_1 | 592007 | 592897 | bglB | 5.18e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| DPGBHBGB_1 | 822707 | 821772 | SP_0676 | 7.29e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| DPGBHBGB_1 | 757679 | 758536 | metF | 8.53e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| DPGBHBGB_1 | 1027066 | 1026362 | covR | 4.32e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| DPGBHBGB_1 | 1200813 | 1200142 | rr01 | 2.96e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| DPGBHBGB_1 | 1027066 | 1026362 | walR | 1.82e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| DPGBHBGB_1 | 764366 | 765034 | CiaR | 9.28e-118 | two-component response regulator | 84.75 | 99.55 | AAK74935 |
| DPGBHBGB_1 | 298339 | 299025 | CovR | 9.92e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| DPGBHBGB_1 | 764366 | 765037 | ciaR | 1.01e-115 | two component system response regulator | 82.59 | 99.12 | AIK75708 |
| DPGBHBGB_1 | 66836 | 67231 | SpxA2 | 3.65e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| DPGBHBGB_1 | 918626 | 919027 | SpxA1 | 3.71e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| DPGBHBGB_1 | 146785 | 147264 | RopE (M5005_Spy_1611) | 2.47e-70 | probable DNA-directed RNA polymerase subunit delta | 80.62 | 83.77 | AAK34603 |
| DPGBHBGB_1 | 1491210 | 1493507 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| DPGBHBGB_1 | 1690854 | 1689835 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 95.88 | 100.00 | ABJ55451 |