Genome ID:GCA_903886195.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 26 | 29 | 38.95 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KPLPNPMH_1 | 695623 | 696413 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 100.00 | 100.00 | - |
| KPLPNPMH_1 | 437359 | 438210 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| KPLPNPMH_1 | 651001 | 651594 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| KPLPNPMH_1 | 442851 | 443807 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226328 |
| KPLPNPMH_1 | 446877 | 448661 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.89 | 100.00 | WP_011226325 |
| KPLPNPMH_1 | 443791 | 444600 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| KPLPNPMH_1 | 615474 | 616235 | srtA | 0.0 | Sortase A | Exoenzyme | 99.87 | 100.00 | - |
| KPLPNPMH_1 | 651001 | 651594 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| KPLPNPMH_1 | 440587 | 441597 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 99.80 | 100.00 | WP_011226330 |
| KPLPNPMH_1 | 441706 | 442854 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.74 | 100.00 | WP_041828290 |
| KPLPNPMH_1 | 445825 | 446880 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.72 | 100.00 | WP_002948022 |
| KPLPNPMH_1 | 880696 | 882354 | fbp54 | 0.0 | FBPs | Adherence | 99.70 | 100.00 | WP_011227179 |
| KPLPNPMH_1 | 651001 | 651594 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| KPLPNPMH_1 | 44880 | 45719 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.64 | 100.00 | WP_011226733 |
| KPLPNPMH_1 | 650132 | 651001 | rfbA | 0.0 | Capsule | Immune modulation | 99.54 | 100.00 | WP_011681286 |
| KPLPNPMH_1 | 762252 | 762983 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 99.45 | 100.00 | WP_011681176 |
| KPLPNPMH_1 | 762992 | 763684 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226047 |
| KPLPNPMH_1 | 444600 | 445805 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226326 |
| KPLPNPMH_1 | 762992 | 763684 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 98.85 | 100.00 | WP_011227247 |
| KPLPNPMH_1 | 779859 | 781274 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.73 | 100.00 | WP_011681165 |
| KPLPNPMH_1 | 760797 | 762251 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.62 | 100.00 | WP_011226049 |
| KPLPNPMH_1 | 760797 | 762251 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 98.49 | 100.00 | WP_041827043 |
| KPLPNPMH_1 | 763694 | 764434 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.38 | 100.00 | WP_011681174 |
| KPLPNPMH_1 | 762252 | 762983 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227248 |
| KPLPNPMH_1 | 762252 | 762983 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.09 | 100.00 | WP_011226048 |
| KPLPNPMH_1 | 763694 | 764429 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.96 | 98.13 | WP_011227246 |
| KPLPNPMH_1 | 763694 | 764434 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.71 | 100.00 | WP_011226046 |
| KPLPNPMH_1 | 760797 | 762251 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.60 | 99.79 | WP_011681177 |
| KPLPNPMH_1 | 439313 | 440587 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.57 | 100.00 | WP_011226331 |
| KPLPNPMH_1 | 764491 | 765858 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 95.69 | 100.00 | WP_011226045 |
| KPLPNPMH_1 | 764491 | 765854 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.94 | 99.71 | WP_011681173 |
| KPLPNPMH_1 | 766087 | 767078 | STU_RS14625* | 0.0 | Capsule | Immune modulation | 92.69 | 99.60 | - |
| KPLPNPMH_1 | 762992 | 763684 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.32 | 100.00 | WP_011681175 |
| KPLPNPMH_1 | 1143524 | 1144827 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| KPLPNPMH_1 | 150585 | 151595 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| KPLPNPMH_1 | 652024 | 653070 | rfbB | 0.0 | Capsule | Immune modulation | 80.71 | 100.00 | WP_009659423 |
| KPLPNPMH_1 | 1595860 | 1597143 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.58 | 99.77 | WP_000107753 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KPLPNPMH_1 | 612787 | 611804 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| KPLPNPMH_1 | 1035595 | 1034522 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| KPLPNPMH_1 | 1228751 | 1227783 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| KPLPNPMH_1 | 274163 | 271860 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| KPLPNPMH_1 | 533337 | 531856 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| KPLPNPMH_1 | 1006913 | 1004667 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| KPLPNPMH_1 | 65755 | 66747 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| KPLPNPMH_1 | 28396 | 29367 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| KPLPNPMH_1 | 387899 | 389050 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| KPLPNPMH_1 | 422377 | 424359 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| KPLPNPMH_1 | 628981 | 630711 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| KPLPNPMH_1 | 1783761 | 1782283 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| KPLPNPMH_1 | 1144827 | 1143526 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| KPLPNPMH_1 | 1769025 | 1767133 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| KPLPNPMH_1 | 1001742 | 1003451 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| KPLPNPMH_1 | 1632957 | 1633967 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| KPLPNPMH_1 | 855067 | 856428 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.02 | 99.56 | ABP90420 |
| KPLPNPMH_1 | 1684974 | 1683082 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| KPLPNPMH_1 | 1159257 | 1158367 | bglB | 1.29e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| KPLPNPMH_1 | 942327 | 943265 | SP_0676 | 1.19e-167 | transcription facot | 81.47 | 97.20 | AAK74821 |
| KPLPNPMH_1 | 1004475 | 1003618 | metF | 8.38e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| KPLPNPMH_1 | 724087 | 724791 | covR | 6.56e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| KPLPNPMH_1 | 559603 | 560274 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| KPLPNPMH_1 | 724087 | 724791 | walR | 3.10e-121 | DNA-binding response regulator | 81.70 | 100.00 | ANC99504 |
| KPLPNPMH_1 | 1439464 | 1438778 | CovR | 9.75e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| KPLPNPMH_1 | 997788 | 997120 | CiaR | 6.89e-117 | two-component response regulator | 83.86 | 99.55 | AAK74935 |
| KPLPNPMH_1 | 997788 | 997117 | ciaR | 6.84e-115 | two component system response regulator | 81.70 | 99.12 | AIK75708 |
| KPLPNPMH_1 | 67044 | 67439 | SpxA2 | 3.59e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| KPLPNPMH_1 | 843709 | 843308 | SpxA1 | 3.65e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| KPLPNPMH_1 | 1595702 | 1595202 | RopE (M5005_Spy_1611) | 9.57e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| KPLPNPMH_1 | 274163 | 271866 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| KPLPNPMH_1 | 1670513 | 1669494 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |