Genome ID:GCA_903886205.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 37 | 29 | 47.01 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BEIGJADO_1 | 43663 | 44502 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| BEIGJADO_1 | 1322288 | 1323139 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| BEIGJADO_1 | 1133211 | 1133972 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| BEIGJADO_1 | 1097854 | 1098447 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| BEIGJADO_1 | 1309810 | 1311555 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| BEIGJADO_1 | 1311557 | 1313257 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| BEIGJADO_1 | 1314477 | 1315283 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| BEIGJADO_1 | 1315283 | 1316224 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| BEIGJADO_1 | 1316221 | 1317369 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| BEIGJADO_1 | 969032 | 970150 | STU_RS14550 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226029 |
| BEIGJADO_1 | 970261 | 970884 | STU_RS14555 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226030 |
| BEIGJADO_1 | 972207 | 973607 | STU_RS14565 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_179970486 |
| BEIGJADO_1 | 974103 | 975095 | STU_RS14570 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226034 |
| BEIGJADO_1 | 975120 | 975845 | STU_RS14575 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041828375 |
| BEIGJADO_1 | 979593 | 980072 | STU_RS14610 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226040 |
| BEIGJADO_1 | 980175 | 980660 | STU_RS14615 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226041 |
| BEIGJADO_1 | 980660 | 981109 | STU_RS14620 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226042 |
| BEIGJADO_1 | 981118 | 982114 | STU_RS14625* | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| BEIGJADO_1 | 982343 | 983710 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226045 |
| BEIGJADO_1 | 984517 | 985209 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226047 |
| BEIGJADO_1 | 985950 | 987404 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226049 |
| BEIGJADO_1 | 862361 | 864019 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| BEIGJADO_1 | 1313275 | 1314477 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011227428 |
| BEIGJADO_1 | 971025 | 972200 | STU_RS14560 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011226032 |
| BEIGJADO_1 | 983767 | 984507 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011226046 |
| BEIGJADO_1 | 976942 | 977582 | STU_RS14590 | 0.0 | Capsule | Immune modulation | 99.84 | 99.84 | WP_041828240 |
| BEIGJADO_1 | 1097854 | 1098447 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BEIGJADO_1 | 1097854 | 1098447 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BEIGJADO_1 | 985218 | 985949 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 99.73 | 100.00 | WP_011226048 |
| BEIGJADO_1 | 1311557 | 1313257 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| BEIGJADO_1 | 1313275 | 1314477 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681436 |
| BEIGJADO_1 | 1314477 | 1315283 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| BEIGJADO_1 | 1315283 | 1316224 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| BEIGJADO_1 | 984517 | 985209 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011227247 |
| BEIGJADO_1 | 1051799 | 1052589 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| BEIGJADO_1 | 968282 | 969045 | STU_RS14545 | 0.0 | Capsule | Immune modulation | 99.35 | 100.53 | WP_011226028 |
| BEIGJADO_1 | 1316221 | 1317369 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| BEIGJADO_1 | 1098447 | 1099316 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| BEIGJADO_1 | 985218 | 985949 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011227248 |
| BEIGJADO_1 | 983767 | 984507 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.38 | 100.00 | WP_011681174 |
| BEIGJADO_1 | 1309810 | 1311555 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| BEIGJADO_1 | 983772 | 984507 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 98.10 | 98.13 | WP_011227246 |
| BEIGJADO_1 | 985950 | 987404 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_041827043 |
| BEIGJADO_1 | 985218 | 985949 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 97.81 | 100.00 | WP_011681176 |
| BEIGJADO_1 | 1320908 | 1322167 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| BEIGJADO_1 | 985950 | 987404 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.47 | 99.79 | WP_011681177 |
| BEIGJADO_1 | 982347 | 983710 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.94 | 99.71 | WP_011681173 |
| BEIGJADO_1 | 984517 | 985209 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011681175 |
| BEIGJADO_1 | 604411 | 605714 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| BEIGJADO_1 | 1603994 | 1605004 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| BEIGJADO_1 | 1314477 | 1315283 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| BEIGJADO_1 | 149039 | 150322 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| BEIGJADO_1 | 1096379 | 1097425 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| BEIGJADO_1 | 975913 | 976251 | STU_RS19955 | 1.32e-175 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148905 |
| BEIGJADO_1 | 1320213 | 1320911 | STER_RS07095 | 2.94e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| BEIGJADO_1 | 1319393 | 1319859 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| BEIGJADO_1 | 1313740 | 1314477 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BEIGJADO_1 | 1136659 | 1137642 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BEIGJADO_1 | 716248 | 717321 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BEIGJADO_1 | 522174 | 523142 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BEIGJADO_1 | 1484472 | 1486775 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| BEIGJADO_1 | 1223522 | 1225003 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| BEIGJADO_1 | 736772 | 739018 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| BEIGJADO_1 | 63294 | 64286 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| BEIGJADO_1 | 27181 | 28152 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BEIGJADO_1 | 1370642 | 1369491 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| BEIGJADO_1 | 1336169 | 1334187 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| BEIGJADO_1 | 1120465 | 1118735 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| BEIGJADO_1 | 1793567 | 1792089 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| BEIGJADO_1 | 604411 | 605712 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BEIGJADO_1 | 1778831 | 1776939 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| BEIGJADO_1 | 741943 | 740234 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| BEIGJADO_1 | 1645688 | 1646698 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BEIGJADO_1 | 889440 | 888079 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| BEIGJADO_1 | 1696025 | 1694133 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| BEIGJADO_1 | 589981 | 590871 | bglB | 2.84e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| BEIGJADO_1 | 801342 | 800407 | SP_0676 | 7.19e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| BEIGJADO_1 | 739210 | 740067 | metF | 8.42e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| BEIGJADO_1 | 1024100 | 1023396 | covR | 3.41e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| BEIGJADO_1 | 1189841 | 1189170 | rr01 | 1.17e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| BEIGJADO_1 | 1024100 | 1023396 | walR | 2.45e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| BEIGJADO_1 | 309223 | 309909 | CovR | 9.80e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BEIGJADO_1 | 745896 | 746546 | CiaR | 1.35e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| BEIGJADO_1 | 745896 | 746546 | ciaR | 6.94e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| BEIGJADO_1 | 64583 | 64978 | SpxA2 | 3.61e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| BEIGJADO_1 | 900798 | 901199 | SpxA1 | 3.66e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BEIGJADO_1 | 150480 | 150980 | RopE (M5005_Spy_1611) | 9.62e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| BEIGJADO_1 | 1484472 | 1486769 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| BEIGJADO_1 | 1681564 | 1680545 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |