Genome ID:GCA_903891135.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 27 | 28 | 38.90 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CKHBGFBL_1 | 43606 | 44445 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| CKHBGFBL_1 | 1306483 | 1307334 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| CKHBGFBL_1 | 1300093 | 1300902 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_002948020 |
| CKHBGFBL_1 | 1303096 | 1304106 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_011226330 |
| CKHBGFBL_1 | 1106016 | 1106609 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| CKHBGFBL_1 | 1300886 | 1301842 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_011226328 |
| CKHBGFBL_1 | 1296032 | 1297816 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.72 | 100.00 | WP_011226325 |
| CKHBGFBL_1 | 1106016 | 1106609 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| CKHBGFBL_1 | 1106016 | 1106609 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| CKHBGFBL_1 | 865600 | 867258 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| CKHBGFBL_1 | 1298888 | 1300093 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226326 |
| CKHBGFBL_1 | 1301839 | 1302987 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | WP_041828290 |
| CKHBGFBL_1 | 1297813 | 1298868 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.53 | 100.00 | WP_002948022 |
| CKHBGFBL_1 | 1061185 | 1061975 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.49 | 100.00 | - |
| CKHBGFBL_1 | 1106609 | 1107478 | rfbA | 0.0 | Capsule | Immune modulation | 99.31 | 100.00 | WP_011681286 |
| CKHBGFBL_1 | 990633 | 991364 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 99.18 | 100.00 | WP_011227248 |
| CKHBGFBL_1 | 1141375 | 1142136 | srtA | 0.0 | Sortase A | Exoenzyme | 98.95 | 100.00 | - |
| CKHBGFBL_1 | 984815 | 986230 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.52 | 100.00 | WP_011681165 |
| CKHBGFBL_1 | 990633 | 991364 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011226048 |
| CKHBGFBL_1 | 989182 | 989922 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.11 | 100.00 | WP_011681174 |
| CKHBGFBL_1 | 989182 | 989922 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.98 | 100.00 | WP_011226046 |
| CKHBGFBL_1 | 990633 | 991364 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 97.95 | 100.00 | WP_011681176 |
| CKHBGFBL_1 | 991365 | 992825 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.74 | 100.00 | WP_011681177 |
| CKHBGFBL_1 | 1304109 | 1305380 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.56 | 99.76 | WP_011226331 |
| CKHBGFBL_1 | 989187 | 989922 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.55 | 98.13 | WP_011227246 |
| CKHBGFBL_1 | 991365 | 992825 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 97.26 | 100.21 | WP_041827043 |
| CKHBGFBL_1 | 991365 | 992825 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.26 | 100.21 | WP_011226049 |
| CKHBGFBL_1 | 987757 | 989124 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 94.81 | 100.00 | WP_011226045 |
| CKHBGFBL_1 | 987759 | 989124 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.36 | 99.85 | WP_011681173 |
| CKHBGFBL_1 | 973937 | 974928 | STU_RS14625* | 0.0 | Capsule | Immune modulation | 91.39 | 99.70 | - |
| CKHBGFBL_1 | 989932 | 990624 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011681175 |
| CKHBGFBL_1 | 989932 | 990624 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 88.46 | 100.00 | WP_011226047 |
| CKHBGFBL_1 | 604071 | 605374 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| CKHBGFBL_1 | 989932 | 990624 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 87.88 | 100.00 | WP_011227247 |
| CKHBGFBL_1 | 1589639 | 1590649 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| CKHBGFBL_1 | 1104541 | 1105587 | rfbB | 0.0 | Capsule | Immune modulation | 80.52 | 100.00 | WP_009659423 |
| CKHBGFBL_1 | 145124 | 146407 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.42 | 99.77 | WP_000107753 |
| CKHBGFBL_1 | 973486 | 973928 | STU_RS14620 | 1.09e-121 | Capsule | Immune modulation | 84.88 | 98.44 | WP_011226042 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CKHBGFBL_1 | 1144823 | 1145806 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| CKHBGFBL_1 | 706444 | 707517 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| CKHBGFBL_1 | 521829 | 522797 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| CKHBGFBL_1 | 1464231 | 1466534 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 93.10 | 99.22 | AAK74619 |
| CKHBGFBL_1 | 726966 | 729212 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| CKHBGFBL_1 | 1209884 | 1211365 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.90 | 100.00 | ABJ54480 |
| CKHBGFBL_1 | 63237 | 64229 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| CKHBGFBL_1 | 27124 | 28095 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| CKHBGFBL_1 | 1350344 | 1349193 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| CKHBGFBL_1 | 1322332 | 1320344 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| CKHBGFBL_1 | 1128627 | 1126897 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| CKHBGFBL_1 | 1770722 | 1769244 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| CKHBGFBL_1 | 604071 | 605372 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| CKHBGFBL_1 | 1755987 | 1754095 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| CKHBGFBL_1 | 732137 | 730428 | PGM | 0.0 | phosphoglucomutase | 83.54 | 99.65 | ACH87041 |
| CKHBGFBL_1 | 1631340 | 1632350 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| CKHBGFBL_1 | 894433 | 893072 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| CKHBGFBL_1 | 1681660 | 1679768 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| CKHBGFBL_1 | 589641 | 590531 | bglB | 5.25e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| CKHBGFBL_1 | 790159 | 789224 | SP_0676 | 6.97e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| CKHBGFBL_1 | 729404 | 730261 | metF | 1.65e-163 | methionine biosynthesis enzymes | 86.01 | 99.31 | AAK74739 |
| CKHBGFBL_1 | 1029534 | 1028830 | covR | 1.03e-130 | responder protein | 85.11 | 100.00 | AAK71319 |
| CKHBGFBL_1 | 1190916 | 1190245 | rr01 | 2.83e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| CKHBGFBL_1 | 1029534 | 1028830 | walR | 5.14e-121 | DNA-binding response regulator | 81.28 | 100.00 | ANC99504 |
| CKHBGFBL_1 | 736090 | 736746 | CiaR | 1.62e-119 | two-component response regulator | 86.76 | 97.77 | AAK74935 |
| CKHBGFBL_1 | 294053 | 294739 | CovR | 9.67e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| CKHBGFBL_1 | 736090 | 736746 | ciaR | 3.23e-117 | two component system response regulator | 84.93 | 96.90 | AIK75708 |
| CKHBGFBL_1 | 64526 | 64921 | SpxA2 | 3.56e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| CKHBGFBL_1 | 146565 | 147065 | RopE (M5005_Spy_1611) | 4.73e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| CKHBGFBL_1 | 1464231 | 1466528 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 83.07 | 98.08 | MYN69560 |
| CKHBGFBL_1 | 1667202 | 1666183 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |