Genome ID：GCA_905310985.2

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HIHHNDKO_1	2606214	2607068	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1
HIHHNDKO_1	2587045	2588247	blt	ARO:3003006	blt	99.75	100.00	L32599.1
HIHHNDKO_1	2357954	2359123	bmr	ARO:3003007	bmr	99.23	100.00	M33768.1
HIHHNDKO_1	1358506	1358823	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
HIHHNDKO_1	1358168	1358506	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HIHHNDKO_1	894972	897542	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
HIHHNDKO_1	591557	593200	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
HIHHNDKO_1	337311	337904	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
HIHHNDKO_1	286755	288188	lmrB	ARO:3002813	lmrB	99.37	100.00	JYFL01000006.1
HIHHNDKO_1	273939	274859	mphK	ARO:3004541	mphK	99.02	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HIHHNDKO_1	4069586	4070962	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034
HIHHNDKO_1	2606216	2607068	aadK	Streptomycin	98.48	99.77	M26879
HIHHNDKO_1	273939	274859	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HIHHNDKO_1	4069589	4070962	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
HIHHNDKO_1	273939	274856	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.02	100.00	WP_003246254.1
HIHHNDKO_1	591560	593200	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
HIHHNDKO_1	2606217	2607068	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
HIHHNDKO_1	4067069	4067587	satA	streptothricin N-acetyltransferase SatA	BLASTX	89.60	100.00	WP_003242546.1
HIHHNDKO_1	2054218	2056815	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.40	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HIHHNDKO_1	2158786	2159427	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
HIHHNDKO_1	3585106	3586287	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
HIHHNDKO_1	3170807	3171592	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
HIHHNDKO_1	3166971	3167909	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391077
HIHHNDKO_1	3169585	3170781	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.17	100.00	NP_391079
HIHHNDKO_1	2004137	2005900	dep/capD	0.0	Capsule	Immune modulation	99.15	100.00	NP_389723
HIHHNDKO_1	3159817	3166951	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.06	99.97	NP_391076
HIHHNDKO_1	3583481	3584623	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
HIHHNDKO_1	3584642	3585091	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470
HIHHNDKO_1	3167937	3169556	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.46	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HIHHNDKO_1	132399	133535	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HIHHNDKO_1	18665	19534	pdxS	3.04e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HIHHNDKO_1	1668403	1669179	CodY	3.32e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
HIHHNDKO_1	3423752	3424321	ClpP	2.46e-98	part of proteolytic complex	81.05	97.44	BAB94595