Genome ID:GCA_905311005.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OMFNGPGA_116571451657483ykkCARO:3003063ykkC100.00100.00AL009126.1
OMFNGPGA_116568281657145ykkDARO:3003064ykkD100.00100.00AL009126.1
OMFNGPGA_1672583673752bmrARO:3003007bmr99.74100.00M33768.1
OMFNGPGA_1498264499466bltARO:3003006blt100.00100.00L32599.1
OMFNGPGA_1479903480757aadKARO:3002627aadK100.00100.00AL009126.1
OMFNGPGA_4108893109813mphKARO:3004541mphK100.00100.00CP010314.1
OMFNGPGA_49555996998lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
OMFNGPGA_84748249125vmlRARO:3004476vmlR100.00100.00NC_000964.3
OMFNGPGA_44590246495tmrBARO:3003059tmrB100.00100.00AL009126.3
OMFNGPGA_32754630116Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OMFNGPGA_1479903480757aadKStreptomycin100.00100.00M26879
OMFNGPGA_4108893109813mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
OMFNGPGA_23655737933tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OMFNGPGA_1479903480754aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
OMFNGPGA_4108896109813mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
OMFNGPGA_23993340451satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
OMFNGPGA_23655737930tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
OMFNGPGA_84748549125vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
OMFNGPGA_1980070982664rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OMFNGPGA_2526536527678capA0.0CapsuleImmune modulation100.00100.00NP_391469
OMFNGPGA_2524872526053capB0.0CapsuleImmune modulation100.00100.00NP_391471
OMFNGPGA_2526068526517capC0.0CapsuleImmune modulation100.00100.00NP_391470
OMFNGPGA_110275591029322dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
OMFNGPGA_2969974970759dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
OMFNGPGA_2973657974595dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
OMFNGPGA_2970785971981dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
OMFNGPGA_2972010973629dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
OMFNGPGA_2974615981751dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
OMFNGPGA_1872457873098hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OMFNGPGA_92820827072tufA0.0elongation factor Tu84.9695.69AHM69299
OMFNGPGA_1243925261pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OMFNGPGA_113438811343105CodY1.69e-124nutrient-responsive regulator81.08100.00ACJ80679
OMFNGPGA_2679290678721ClpP6.52e-99part of proteolytic complex81.0597.44BAB94595
OMFNGPGA_118062981805906spxA15.01e-69redox-responsive transcription factor83.21100.00AAF21893
OMFNGPGA_102089921141SpoVG7.57e-39RNA-binding protein81.4879.41AAT02994
OMFNGPGA_820102207CspA3.38e-32cold shock protein90.91100.00CAA62903