Genome ID:GCA_905315375.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LOJCLDLB_2495358495696ykkCARO:3003063ykkC99.11100.00AL009126.1
LOJCLDLB_2495041495358ykkDARO:3003064ykkD98.10100.00AL009126.1
LOJCLDLB_1481848482702aadKARO:3002627aadK98.59100.00AL009126.1
LOJCLDLB_1463160464362bltARO:3003006blt99.50100.00L32599.1
LOJCLDLB_4356791358416vmlRARO:3004476vmlR98.5298.90NC_000964.3
LOJCLDLB_1293045294214bmrARO:3003007bmr99.74100.00M33768.1
LOJCLDLB_49836698959tmrBARO:3003059tmrB99.49100.00AL009126.3
LOJCLDLB_44783149270lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
LOJCLDLB_43501935939mphKARO:3004541mphK97.06100.00CP010314.1
LOJCLDLB_62747330043Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LOJCLDLB_3655913657289tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.42100.00D12567
LOJCLDLB_1481848482702aadKStreptomycin98.83100.00M26879
LOJCLDLB_43501935939mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LOJCLDLB_3655916657289tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.34100.00WP_063856081.1
LOJCLDLB_1481851482702aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
LOJCLDLB_4356794358416vmlRABC-F type ribosomal protection protein VmlRBLASTX98.5298.90WP_003234144.1
LOJCLDLB_43501935936mphKmacrolide 2'-phosphotransferase MphKBLASTX97.06100.00WP_003246254.1
LOJCLDLB_3653383653901satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
LOJCLDLB_95501257609rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.71100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LOJCLDLB_5265103266722dhbE0.0BacillibactinNutritional/Metabolic factor99.81100.00NP_391078
LOJCLDLB_5266750267688dhbB0.0BacillibactinNutritional/Metabolic factor99.79100.00NP_391077
LOJCLDLB_3142723143904capB0.0CapsuleImmune modulation99.75100.00NP_391471
LOJCLDLB_9831610079dep/capD0.0CapsuleImmune modulation99.60100.00NP_389723
LOJCLDLB_5263067263852dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
LOJCLDLB_3141098142240capA0.0CapsuleImmune modulation99.47100.00NP_391469
LOJCLDLB_19001390654hlyIII0.0Hemolysin IIIExotoxin99.38100.00NP_390062
LOJCLDLB_3142259142708capC0.0CapsuleImmune modulation99.33100.00NP_391470
LOJCLDLB_5267708274844dhbF0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391076
LOJCLDLB_5263878265074dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LOJCLDLB_123179932935tufA0.0elongation factor Tu84.9695.69AHM69299
LOJCLDLB_151133410465pdxS1.14e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
LOJCLDLB_2184734183958CodY1.82e-124nutrient-responsive regulator81.08100.00ACJ80679
LOJCLDLB_586848115ClpP2.27e-99part of proteolytic complex81.0597.44BAB94595
LOJCLDLB_2646062645670spxA12.22e-69redox-responsive transcription factor83.21100.00AAF21893
LOJCLDLB_142081421056SpoVG7.55e-39RNA-binding protein81.4879.41AAT02994
LOJCLDLB_4298140298337CspA1.67e-31cold shock protein90.91100.00CAA62903
LOJCLDLB_1102615102809CspD6.09e-28cold shock protein81.5498.48CAC99957