Genome ID:GCA_905315385.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 8 | 18.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMJBDFML_3 | 629717 | 630886 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| AMJBDFML_3 | 456328 | 457530 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| AMJBDFML_2 | 439356 | 439673 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| AMJBDFML_2 | 439018 | 439356 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| AMJBDFML_3 | 437960 | 438814 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| AMJBDFML_4 | 430168 | 431811 | vmlR | ARO:3004476 | vmlR | 98.72 | 100.00 | NC_000964.3 |
| AMJBDFML_6 | 158554 | 161124 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| AMJBDFML_4 | 154880 | 155473 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| AMJBDFML_4 | 104359 | 105792 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| AMJBDFML_4 | 91543 | 92463 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AMJBDFML_9 | 34770 | 36146 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
| AMJBDFML_3 | 437960 | 438814 | aadK | Streptomycin | 98.71 | 100.00 | M26879 |
| AMJBDFML_4 | 91543 | 92463 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMJBDFML_9 | 34770 | 36143 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| AMJBDFML_4 | 430171 | 431811 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.72 | 100.00 | WP_003234144.1 |
| AMJBDFML_3 | 437960 | 438811 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| AMJBDFML_4 | 91543 | 92460 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| AMJBDFML_9 | 38145 | 38663 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| AMJBDFML_7 | 92495 | 95092 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.29 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AMJBDFML_3 | 829636 | 830277 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.84 | 100.00 | NP_390062 |
| AMJBDFML_1 | 414529 | 415710 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| AMJBDFML_1 | 869693 | 870478 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| AMJBDFML_1 | 873376 | 874314 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| AMJBDFML_1 | 874334 | 881470 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.41 | 100.00 | NP_391076 |
| AMJBDFML_1 | 415725 | 416174 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| AMJBDFML_1 | 416193 | 417335 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| AMJBDFML_1 | 870504 | 871700 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| AMJBDFML_7 | 143220 | 144983 | dep/capD | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_389723 |
| AMJBDFML_1 | 871729 | 873348 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.33 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AMJBDFML_10 | 31764 | 32900 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| AMJBDFML_12 | 4356 | 5225 | pdxS | 1.13e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| AMJBDFML_2 | 749454 | 750230 | CodY | 7.70e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| AMJBDFML_1 | 577861 | 577292 | ClpP | 5.91e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| AMJBDFML_2 | 289229 | 289621 | spxA1 | 6.05e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| AMJBDFML_2 | 289229 | 289621 | spx | 3.61e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| AMJBDFML_11 | 20605 | 20847 | SpoVG | 7.53e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| AMJBDFML_4 | 381775 | 381972 | CspA | 1.99e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| AMJBDFML_3 | 817671 | 817477 | CspD | 5.24e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |