Genome ID:GCA_905315685.2
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELGEEJAH_1 | 2582527 | 2583381 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
| ELGEEJAH_1 | 2563783 | 2564985 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| ELGEEJAH_1 | 2336678 | 2337847 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| ELGEEJAH_1 | 1348156 | 1348473 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| ELGEEJAH_1 | 1347818 | 1348156 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| ELGEEJAH_1 | 888168 | 890738 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| ELGEEJAH_1 | 576240 | 577883 | vmlR | ARO:3004476 | vmlR | 98.17 | 100.00 | NC_000964.3 |
| ELGEEJAH_1 | 332766 | 333359 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| ELGEEJAH_1 | 282207 | 283640 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| ELGEEJAH_1 | 269394 | 270314 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ELGEEJAH_1 | 269394 | 270314 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| ELGEEJAH_1 | 4055623 | 4056999 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.42 | 100.00 | X08034 |
| ELGEEJAH_1 | 2582529 | 2583381 | aadK | Streptomycin | 98.94 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELGEEJAH_1 | 269394 | 270311 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| ELGEEJAH_1 | 4055626 | 4056999 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.34 | 100.00 | WP_003242953.1 |
| ELGEEJAH_1 | 2582530 | 2583381 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| ELGEEJAH_1 | 576243 | 577883 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.17 | 100.00 | WP_003234144.1 |
| ELGEEJAH_1 | 4053124 | 4053642 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| ELGEEJAH_1 | 2027783 | 2030377 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.03 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ELGEEJAH_1 | 2137311 | 2137952 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| ELGEEJAH_1 | 3127657 | 3134793 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.96 | 100.00 | NP_391076 |
| ELGEEJAH_1 | 3134813 | 3135751 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.89 | 100.00 | NP_391077 |
| ELGEEJAH_1 | 3135779 | 3137398 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.81 | 100.00 | NP_391078 |
| ELGEEJAH_1 | 3546793 | 3547974 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| ELGEEJAH_1 | 1977396 | 1979159 | dep/capD | 0.0 | Capsule | Immune modulation | 99.60 | 100.00 | NP_389723 |
| ELGEEJAH_1 | 3546329 | 3546778 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| ELGEEJAH_1 | 3138649 | 3139434 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| ELGEEJAH_1 | 3545168 | 3546310 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| ELGEEJAH_1 | 3137427 | 3138623 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ELGEEJAH_1 | 132397 | 133533 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| ELGEEJAH_1 | 18665 | 19534 | pdxS | 3.03e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| ELGEEJAH_1 | 1661512 | 1662288 | CodY | 3.31e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ELGEEJAH_1 | 3393581 | 3394150 | ClpP | 2.46e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |