Genome ID:GCA_965136255.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4267.48

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FFOHNJHJ_64832749373clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FFOHNJHJ_64833049373cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9099.33KR610408
FFOHNJHJ_31082112197tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.07100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FFOHNJHJ_64833049373clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
FFOHNJHJ_31082712197tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.4399.78WP_003242953.1
FFOHNJHJ_65112451642satAstreptothricin N-acetyltransferase SatABLASTX82.66100.00WP_003242546.1
FFOHNJHJ_256483245rphCrifamycin-inactivating phosphotransferase RphCINTERNAL_STOP80.94100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FFOHNJHJ_72563026811capB0.0CapsuleImmune modulation81.7999.66NP_391471
FFOHNJHJ_72682627275capC1.23e-114CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FFOHNJHJ_152792226786tufA0.0elongation factor Tu86.5495.69AHM69299
FFOHNJHJ_231250011631pdxS6.40e-153encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
FFOHNJHJ_2200308201084CodY3.29e-125nutrient-responsive regulator81.08100.00ACJ80679
FFOHNJHJ_4326455326847spxA14.72e-70redox-responsive transcription factor83.21100.00AAF21893
FFOHNJHJ_66585965662CspA5.27e-32cold shock protein92.42100.00CAA62903
FFOHNJHJ_1104943105137CspD1.20e-27cold shock protein80.0098.48CAC99957
FFOHNJHJ_1104943105140CspB2.48e-27cold shock protein80.30100.00CAD00094
FFOHNJHJ_66585965665CspR2.61e-26cold shock protein80.0098.48AAO82613