ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
COLPEBDN_00001 0.0 tnpA - - L - - - Transposase
COLPEBDN_00002 6.04e-281 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
COLPEBDN_00003 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
COLPEBDN_00004 1.4e-148 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
COLPEBDN_00005 4.02e-89 - - - S - - - Protein of unknown function (DUF4235)
COLPEBDN_00006 1.44e-181 nfrA - - C - - - Nitroreductase family
COLPEBDN_00007 4.78e-59 - - - - - - - -
COLPEBDN_00008 9.5e-129 iolT - - EGP - - - Major facilitator Superfamily
COLPEBDN_00009 8.79e-10 - - - - - - - -
COLPEBDN_00010 8.6e-293 xylR - - GK - - - ROK family
COLPEBDN_00011 0.0 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
COLPEBDN_00012 0.0 - - - G - - - candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
COLPEBDN_00013 3.21e-299 - - CE10 I ko:K03929 - ko00000,ko01000 Belongs to the type-B carboxylesterase lipase family
COLPEBDN_00014 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
COLPEBDN_00015 0.0 - 3.2.1.37 GH43 G ko:K01198 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
COLPEBDN_00016 1.07e-203 - - - P ko:K02026,ko:K10119,ko:K17243 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00017 1.54e-246 - - - U ko:K02025,ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00018 1.02e-310 - - - G ko:K02027,ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter periplasmic binding protein YcjN precursor K02027
COLPEBDN_00019 2.63e-241 - - - K ko:K02529,ko:K17640 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
COLPEBDN_00020 0.0 - 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
COLPEBDN_00021 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Belongs to the xylose isomerase family
COLPEBDN_00022 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
COLPEBDN_00023 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
COLPEBDN_00024 7.41e-289 - - - G - - - MFS/sugar transport protein
COLPEBDN_00025 9.15e-158 - - - K - - - Bacterial regulatory proteins, tetR family
COLPEBDN_00026 1.87e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
COLPEBDN_00027 4.68e-314 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
COLPEBDN_00028 3.01e-165 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
COLPEBDN_00029 7.3e-275 - - - K - - - helix_turn _helix lactose operon repressor
COLPEBDN_00030 1.3e-48 - - - - - - - -
COLPEBDN_00031 3.58e-213 - 3.6.3.17 - G ko:K02056,ko:K10545 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00032 1.59e-71 - - - - - - - -
COLPEBDN_00033 2.57e-250 - - - K - - - helix_turn _helix lactose operon repressor
COLPEBDN_00034 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
COLPEBDN_00035 0.0 araB - - G - - - FGGY family of carbohydrate kinases, C-terminal domain
COLPEBDN_00036 1.14e-166 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
COLPEBDN_00037 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
COLPEBDN_00038 4.08e-216 - - - S - - - Oxidoreductase, aldo keto reductase family protein
COLPEBDN_00039 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COLPEBDN_00040 0.0 - - - S - - - Threonine/Serine exporter, ThrE
COLPEBDN_00041 0.0 - - - EGP - - - Major Facilitator Superfamily
COLPEBDN_00042 1.51e-159 - - - G - - - Phosphoglycerate mutase family
COLPEBDN_00043 2.38e-224 - - - - - - - -
COLPEBDN_00044 1.74e-130 - - - S - - - GtrA-like protein
COLPEBDN_00045 5.83e-255 - - - S - - - Protein conserved in bacteria
COLPEBDN_00046 9.48e-83 - - - S - - - Macrophage migration inhibitory factor (MIF)
COLPEBDN_00047 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
COLPEBDN_00048 3.43e-281 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
COLPEBDN_00049 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
COLPEBDN_00050 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
COLPEBDN_00051 6.8e-181 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
COLPEBDN_00052 1.16e-285 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
COLPEBDN_00053 2.72e-142 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
COLPEBDN_00054 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
COLPEBDN_00055 4.9e-281 - - - I - - - PAP2 superfamily
COLPEBDN_00057 2.86e-274 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Myo-inositol-1-phosphate synthase
COLPEBDN_00059 2.61e-294 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
COLPEBDN_00061 4.41e-232 - - - K - - - Psort location Cytoplasmic, score
COLPEBDN_00062 1.1e-199 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00063 1.7e-197 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
COLPEBDN_00064 3.35e-140 - - - S - - - Protein of unknown function, DUF624
COLPEBDN_00065 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
COLPEBDN_00066 0.0 malL 2.4.1.4, 3.2.1.1, 3.2.1.20, 5.4.99.16 GH13,GH31 G ko:K01187,ko:K05341,ko:K05343 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
COLPEBDN_00067 5.8e-303 malE - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
COLPEBDN_00068 0.0 malC - - G ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00069 2.29e-226 malG - - G ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00070 0.0 apuB 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
COLPEBDN_00071 1.55e-190 - - - S ko:K07025 - ko00000 HAD-hyrolase-like
COLPEBDN_00072 8.73e-187 traX - - S - - - TraX protein
COLPEBDN_00073 4.59e-247 - - - K - - - Psort location Cytoplasmic, score
COLPEBDN_00075 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
COLPEBDN_00076 6.25e-132 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
COLPEBDN_00077 4.87e-238 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
COLPEBDN_00078 1.43e-119 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
COLPEBDN_00079 1.2e-166 - - - S - - - HAD hydrolase, family IA, variant 3
COLPEBDN_00080 4.71e-146 - - - K - - - Bacterial regulatory proteins, tetR family
COLPEBDN_00081 0.0 bgl2 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
COLPEBDN_00082 6.19e-163 - - - S - - - GyrI-like small molecule binding domain
COLPEBDN_00084 2.12e-174 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
COLPEBDN_00085 1.2e-201 - - - I - - - alpha/beta hydrolase fold
COLPEBDN_00086 0.0 pmt 2.4.1.109 GT39 O ko:K00728 ko00514,ko00515,ko01100,map00514,map00515,map01100 ko00000,ko00001,ko01000,ko01003 C-terminal four TMM region of protein-O-mannosyltransferase
COLPEBDN_00087 3.49e-221 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
COLPEBDN_00088 9.93e-94 - - - - - - - -
COLPEBDN_00089 2.01e-167 - - - - - - - -
COLPEBDN_00090 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
COLPEBDN_00091 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
COLPEBDN_00092 1.05e-299 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
COLPEBDN_00093 2.34e-266 amsE - - M - - - Glycosyl transferase family 2
COLPEBDN_00095 3.65e-253 - - - S - - - Glycosyltransferase, group 2 family protein
COLPEBDN_00096 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
COLPEBDN_00097 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
COLPEBDN_00098 0.0 glfT 2.4.1.288 GT2 S ko:K16650 - ko00000,ko01000,ko01003 Glycosyltransferase like family 2
COLPEBDN_00099 2.57e-226 - - - M - - - Glycosyl hydrolases family 25
COLPEBDN_00100 0.0 - - - M - - - Glycosyl hydrolases family 25
COLPEBDN_00101 2.61e-239 tnp3503b - - L - - - Transposase and inactivated derivatives
COLPEBDN_00102 1.62e-78 - - - S - - - Leucine-rich repeat (LRR) protein
COLPEBDN_00103 3.31e-130 - - - M - - - hydrolase, family 25
COLPEBDN_00104 3.29e-172 - - - - - - - -
COLPEBDN_00105 0.0 - - - S - - - Polysaccharide pyruvyl transferase
COLPEBDN_00106 0.0 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_00107 5.64e-194 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
COLPEBDN_00108 0.0 - - - S - - - Glycosyltransferase like family 2
COLPEBDN_00110 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
COLPEBDN_00111 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
COLPEBDN_00112 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_00113 0.0 - - - V - - - ABC transporter permease
COLPEBDN_00114 4.6e-249 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
COLPEBDN_00115 8.09e-195 - - - T ko:K06950 - ko00000 HD domain
COLPEBDN_00116 1.17e-217 - - - S - - - Glutamine amidotransferase domain
COLPEBDN_00117 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
COLPEBDN_00118 1.7e-235 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
COLPEBDN_00119 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
COLPEBDN_00120 6.89e-166 - - - - - - - -
COLPEBDN_00121 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
COLPEBDN_00122 4.45e-253 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
COLPEBDN_00123 3.76e-218 iunH2 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
COLPEBDN_00124 0.0 - - - EGP ko:K08168 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
COLPEBDN_00125 9.03e-223 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
COLPEBDN_00126 8.13e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
COLPEBDN_00127 5.36e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
COLPEBDN_00128 1.77e-124 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
COLPEBDN_00129 1.06e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
COLPEBDN_00130 3.61e-96 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
COLPEBDN_00131 6.82e-174 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
COLPEBDN_00135 7.69e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
COLPEBDN_00136 7.84e-218 - - - M - - - Protein of unknown function (DUF3152)
COLPEBDN_00137 3.88e-251 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
COLPEBDN_00138 3.91e-200 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
COLPEBDN_00139 5.75e-244 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
COLPEBDN_00140 0.0 - - - Q - - - von Willebrand factor (vWF) type A domain
COLPEBDN_00141 0.0 - - - M - - - domain protein
COLPEBDN_00142 4.56e-109 - - - - - - - -
COLPEBDN_00143 1.32e-201 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
COLPEBDN_00144 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
COLPEBDN_00145 0.0 - - - P - - - E1-E2 ATPase
COLPEBDN_00146 6.33e-148 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COLPEBDN_00147 7.8e-196 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
COLPEBDN_00148 2.77e-176 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
COLPEBDN_00149 8.48e-198 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
COLPEBDN_00150 4.42e-34 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
COLPEBDN_00151 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
COLPEBDN_00152 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
COLPEBDN_00153 7.27e-252 - - - J - - - Acetyltransferase (GNAT) domain
COLPEBDN_00154 1.87e-68 - - - S - - - Protein of unknown function (DUF2469)
COLPEBDN_00155 0.0 - - - H - - - Flavin containing amine oxidoreductase
COLPEBDN_00156 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
COLPEBDN_00157 0.0 - - - S - - - domain protein
COLPEBDN_00158 1.91e-83 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
COLPEBDN_00159 1e-135 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
COLPEBDN_00160 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
COLPEBDN_00161 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
COLPEBDN_00162 4.39e-178 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
COLPEBDN_00163 6.99e-177 glnR - - KT - - - Transcriptional regulatory protein, C terminal
COLPEBDN_00164 3.16e-197 - - - - - - - -
COLPEBDN_00165 3.01e-120 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
COLPEBDN_00166 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
COLPEBDN_00167 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
COLPEBDN_00168 0.0 - - - M ko:K13735 ko05100,map05100 ko00000,ko00001 domain protein
COLPEBDN_00169 0.0 - - - P - - - Voltage gated chloride channel
COLPEBDN_00170 0.0 oxc 4.1.1.8 - EH ko:K01577 ko00630,ko01100,map00630,map01100 ko00000,ko00001,ko01000 Thiamine pyrophosphate enzyme, central domain
COLPEBDN_00171 5.91e-222 - - - S ko:K07088 - ko00000 Membrane transport protein
COLPEBDN_00172 4.97e-276 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 hydrolase family 5
COLPEBDN_00173 0.0 frc 2.8.3.15, 2.8.3.16 - C ko:K07544,ko:K07749 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
COLPEBDN_00174 2.89e-292 - - - L - - - Phage integrase family
COLPEBDN_00175 1.17e-280 - - - H - - - Adenine-specific methyltransferase EcoRI
COLPEBDN_00176 1.39e-284 - - - L - - - HNH endonuclease
COLPEBDN_00177 9.18e-49 - - - - - - - -
COLPEBDN_00178 8.16e-159 - - - S - - - Plasmid replication protein
COLPEBDN_00179 9.79e-182 - - - D ko:K03466 - ko00000,ko03036 ftsk spoiiie
COLPEBDN_00180 2.44e-86 - - - - - - - -
COLPEBDN_00181 5.62e-37 - - - - - - - -
COLPEBDN_00182 2.08e-270 - - - - - - - -
COLPEBDN_00184 6.66e-235 rihB 3.2.2.1, 3.2.2.8 - F ko:K01239,ko:K01250,ko:K10213 ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
COLPEBDN_00185 0.0 - - - EGP - - - Major Facilitator Superfamily
COLPEBDN_00186 1.61e-261 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
COLPEBDN_00187 3.54e-188 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
COLPEBDN_00188 2.54e-42 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
COLPEBDN_00189 2.71e-95 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
COLPEBDN_00190 7.19e-196 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
COLPEBDN_00191 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
COLPEBDN_00192 1.72e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
COLPEBDN_00193 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
COLPEBDN_00194 1.28e-65 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
COLPEBDN_00195 4.85e-180 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
COLPEBDN_00196 2.58e-223 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
COLPEBDN_00197 9.9e-276 - - - - - - - -
COLPEBDN_00198 6.91e-235 - - - - - - - -
COLPEBDN_00199 1.96e-219 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
COLPEBDN_00201 2.42e-235 - 2.4.1.20 GT36 G ko:K00702 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolase 36 superfamily, catalytic domain
COLPEBDN_00202 9.46e-144 - - - P ko:K02026,ko:K10242 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00203 1.23e-86 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
COLPEBDN_00204 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
COLPEBDN_00205 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
COLPEBDN_00206 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
COLPEBDN_00207 1.26e-311 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
COLPEBDN_00208 4.17e-236 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COLPEBDN_00209 0.0 - - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
COLPEBDN_00210 0.0 - 3.2.1.185 GH127 S ko:K09955,ko:K18205 - ko00000,ko01000 Beta-L-arabinofuranosidase, GH127
COLPEBDN_00211 2.59e-257 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
COLPEBDN_00212 2.72e-187 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
COLPEBDN_00213 1.43e-284 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
COLPEBDN_00214 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
COLPEBDN_00216 2.78e-237 - - - K - - - Psort location Cytoplasmic, score
COLPEBDN_00217 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
COLPEBDN_00218 3.43e-206 - - - G ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00219 1.35e-238 - - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00220 1.66e-308 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
COLPEBDN_00221 2.57e-297 - - - GK - - - ROK family
COLPEBDN_00222 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
COLPEBDN_00223 4.78e-110 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
COLPEBDN_00224 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
COLPEBDN_00225 3.82e-232 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
COLPEBDN_00226 2.47e-253 - - - D - - - nuclear chromosome segregation
COLPEBDN_00227 5.78e-143 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
COLPEBDN_00228 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
COLPEBDN_00229 3.62e-223 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
COLPEBDN_00230 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
COLPEBDN_00231 6.27e-270 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
COLPEBDN_00232 1.41e-241 - - - U ko:K10716 - ko00000,ko02000 Ion channel
COLPEBDN_00233 0.0 - - - KLT - - - Protein tyrosine kinase
COLPEBDN_00234 3.47e-114 - - - O - - - Thioredoxin
COLPEBDN_00236 7.02e-285 rpfB - - S ko:K21688 - ko00000 G5
COLPEBDN_00237 1.13e-208 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
COLPEBDN_00238 1.44e-227 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
COLPEBDN_00239 1.51e-145 - - - S - - - LytR cell envelope-related transcriptional attenuator
COLPEBDN_00240 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
COLPEBDN_00241 1.51e-239 mutT4 - - L - - - Belongs to the Nudix hydrolase family
COLPEBDN_00242 0.0 - - - - - - - -
COLPEBDN_00243 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
COLPEBDN_00244 2.29e-228 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
COLPEBDN_00245 0.0 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
COLPEBDN_00246 2.2e-225 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
COLPEBDN_00247 1.82e-174 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
COLPEBDN_00248 4.13e-122 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
COLPEBDN_00249 8.06e-234 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
COLPEBDN_00250 9.33e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
COLPEBDN_00251 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
COLPEBDN_00252 7.9e-263 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
COLPEBDN_00253 0.0 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
COLPEBDN_00254 2.35e-117 - - - S - - - Protein of unknown function (DUF721)
COLPEBDN_00255 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
COLPEBDN_00256 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
COLPEBDN_00257 2.65e-108 - - - S - - - Transmembrane domain of unknown function (DUF3566)
COLPEBDN_00258 3.27e-279 - - - V - - - VanZ like family
COLPEBDN_00259 3.88e-207 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
COLPEBDN_00260 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
COLPEBDN_00261 4.42e-307 - - - EGP - - - Transporter major facilitator family protein
COLPEBDN_00262 6.85e-218 - 3.2.1.78 GH26 G ko:K01218 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 Glycosyl hydrolase family 26
COLPEBDN_00263 1.39e-95 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
COLPEBDN_00264 3.45e-68 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
COLPEBDN_00267 4.87e-187 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
COLPEBDN_00268 2.87e-101 - - - - - - - -
COLPEBDN_00269 6.65e-198 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
COLPEBDN_00270 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
COLPEBDN_00271 2.44e-191 - - - Q - - - ubiE/COQ5 methyltransferase family
COLPEBDN_00272 1.79e-214 - - - - - - - -
COLPEBDN_00273 5.12e-139 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
COLPEBDN_00274 3.41e-155 - - - - - - - -
COLPEBDN_00275 3.27e-25 - - - - - - - -
COLPEBDN_00278 2.13e-75 - - - S - - - MazG-like family
COLPEBDN_00279 1.15e-31 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
COLPEBDN_00281 2.53e-243 - 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
COLPEBDN_00282 2.61e-60 - - - S - - - Type II restriction endonuclease EcoO109I
COLPEBDN_00283 0.0 - - - - - - - -
COLPEBDN_00284 1.94e-143 - - - - - - - -
COLPEBDN_00285 0.0 - - - - - - - -
COLPEBDN_00286 0.0 - - - - - - - -
COLPEBDN_00287 1.06e-52 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
COLPEBDN_00288 5.7e-30 - - - K - - - SpoVT / AbrB like domain
COLPEBDN_00289 1.01e-86 - - - T ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
COLPEBDN_00290 1.46e-210 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
COLPEBDN_00291 1.14e-30 akr5f 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
COLPEBDN_00292 6.38e-154 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 Aldo/keto reductase family
COLPEBDN_00293 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
COLPEBDN_00294 4.75e-110 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family
COLPEBDN_00295 1.13e-26 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family
COLPEBDN_00296 1.92e-115 - - - S - - - Domain of unknown function (DUF4234)
COLPEBDN_00297 9.55e-217 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
COLPEBDN_00298 9.47e-225 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
COLPEBDN_00299 2.61e-150 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
COLPEBDN_00300 1.04e-268 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
COLPEBDN_00301 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
COLPEBDN_00302 1.09e-158 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
COLPEBDN_00303 1.72e-200 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
COLPEBDN_00304 0.0 - - - L - - - PIF1-like helicase
COLPEBDN_00305 7.39e-98 - - - - - - - -
COLPEBDN_00306 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
COLPEBDN_00307 6.13e-174 - - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
COLPEBDN_00308 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
COLPEBDN_00309 1.78e-133 - - - S - - - Short repeat of unknown function (DUF308)
COLPEBDN_00310 1.86e-165 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
COLPEBDN_00311 0.0 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
COLPEBDN_00312 6.33e-109 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
COLPEBDN_00313 1.57e-236 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
COLPEBDN_00314 1.65e-265 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
COLPEBDN_00315 1.64e-298 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
COLPEBDN_00316 2.42e-209 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
COLPEBDN_00317 3.74e-282 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
COLPEBDN_00318 1.36e-105 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
COLPEBDN_00319 3.92e-213 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
COLPEBDN_00320 3.75e-215 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
COLPEBDN_00321 6.2e-208 yecS - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00322 2.6e-197 tcyC 3.6.3.21 - E ko:K02028,ko:K02029 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00323 2.66e-231 - - - K - - - Psort location Cytoplasmic, score
COLPEBDN_00324 1.98e-164 - - - K - - - helix_turn_helix, Lux Regulon
COLPEBDN_00325 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
COLPEBDN_00326 2.61e-184 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
COLPEBDN_00327 6.41e-89 - - - - - - - -
COLPEBDN_00328 1.14e-175 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COLPEBDN_00329 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
COLPEBDN_00330 7.86e-217 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00331 8.71e-201 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00332 4.99e-181 oppDF2 - - P ko:K02031,ko:K02032,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00333 9.13e-180 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00334 3.07e-284 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
COLPEBDN_00335 5.12e-243 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
COLPEBDN_00336 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
COLPEBDN_00337 1.01e-221 - - - S - - - Protein conserved in bacteria
COLPEBDN_00338 1.29e-135 - - - J - - - Acetyltransferase (GNAT) domain
COLPEBDN_00341 4.02e-52 - - - S - - - Protein of unknown function (DUF1706)
COLPEBDN_00342 1.14e-30 M1-431 - - S - - - Protein of unknown function (DUF1706)
COLPEBDN_00344 3.78e-76 - - - - - - - -
COLPEBDN_00345 4.86e-84 - - - - - - - -
COLPEBDN_00346 7.91e-95 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
COLPEBDN_00347 0.0 - - - KL - - - Domain of unknown function (DUF3427)
COLPEBDN_00348 8.48e-81 - - - S - - - Fic/DOC family
COLPEBDN_00349 0.0 - - - S - - - Protein of unknown function (DUF1524)
COLPEBDN_00350 3.33e-123 - - - S - - - Protein of unknown function (DUF4065)
COLPEBDN_00351 9.13e-119 - - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
COLPEBDN_00352 2.04e-114 - - - K - - - Acetyltransferase (GNAT) domain
COLPEBDN_00353 5.05e-190 - - - S - - - 3-oxo-5-alpha-steroid 4-dehydrogenase
COLPEBDN_00354 3.3e-290 gldA 1.1.1.6 - C ko:K00005,ko:K08317 ko00561,ko00640,ko01100,map00561,map00640,map01100 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
COLPEBDN_00355 8.52e-122 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
COLPEBDN_00356 1.21e-129 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
COLPEBDN_00357 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
COLPEBDN_00358 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
COLPEBDN_00359 6.68e-282 - - - P - - - Citrate transporter
COLPEBDN_00361 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
COLPEBDN_00362 6.53e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
COLPEBDN_00363 1.2e-286 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
COLPEBDN_00364 2.4e-93 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
COLPEBDN_00365 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
COLPEBDN_00366 0.0 - - - S - - - Putative esterase
COLPEBDN_00367 2.74e-305 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
COLPEBDN_00368 3.44e-251 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
COLPEBDN_00369 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
COLPEBDN_00370 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
COLPEBDN_00371 7.52e-95 - - - - - - - -
COLPEBDN_00372 9.81e-297 - - - S - - - 50S ribosome-binding GTPase
COLPEBDN_00373 1.21e-130 - - - - - - - -
COLPEBDN_00374 1.97e-116 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
COLPEBDN_00375 1.97e-140 - - - K - - - sequence-specific DNA binding
COLPEBDN_00377 0.0 - - - - - - - -
COLPEBDN_00378 2.73e-162 - - - - - - - -
COLPEBDN_00379 2.77e-90 - - - - - - - -
COLPEBDN_00380 4.96e-139 - - - - - - - -
COLPEBDN_00381 4.93e-286 - - - S - - - Short C-terminal domain
COLPEBDN_00382 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
COLPEBDN_00383 4.83e-176 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
COLPEBDN_00384 8.01e-297 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
COLPEBDN_00385 3.4e-300 - - - M - - - Glycosyl transferase 4-like domain
COLPEBDN_00386 2.78e-253 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
COLPEBDN_00388 8.2e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
COLPEBDN_00389 1.34e-104 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
COLPEBDN_00390 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
COLPEBDN_00391 2.25e-294 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
COLPEBDN_00392 1.07e-157 - - - C - - - COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
COLPEBDN_00393 8.01e-123 - - - - - - - -
COLPEBDN_00394 7.02e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
COLPEBDN_00395 1.34e-103 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
COLPEBDN_00396 6.95e-306 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
COLPEBDN_00397 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
COLPEBDN_00398 5.67e-232 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
COLPEBDN_00399 6.35e-148 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
COLPEBDN_00400 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
COLPEBDN_00401 4.74e-60 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
COLPEBDN_00402 8.72e-279 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
COLPEBDN_00403 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
COLPEBDN_00404 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
COLPEBDN_00405 1.06e-235 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
COLPEBDN_00406 8.15e-110 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
COLPEBDN_00407 5.9e-163 - - - S - - - SNARE associated Golgi protein
COLPEBDN_00408 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
COLPEBDN_00409 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
COLPEBDN_00410 4.64e-220 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
COLPEBDN_00411 8.24e-41 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
COLPEBDN_00412 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
COLPEBDN_00413 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
COLPEBDN_00414 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
COLPEBDN_00415 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
COLPEBDN_00416 0.0 - - - S - - - PGAP1-like protein
COLPEBDN_00418 1.09e-125 - - - - - - - -
COLPEBDN_00419 1.23e-230 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
COLPEBDN_00420 1.13e-249 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
COLPEBDN_00421 9.9e-116 - - - - - - - -
COLPEBDN_00422 1.98e-231 - - - S - - - Protein of unknown function DUF58
COLPEBDN_00423 1.79e-246 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
COLPEBDN_00424 1.57e-180 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
COLPEBDN_00425 9.65e-114 - - - S - - - LytR cell envelope-related transcriptional attenuator
COLPEBDN_00426 4.22e-45 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
COLPEBDN_00427 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
COLPEBDN_00428 5.15e-134 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
COLPEBDN_00429 1.07e-165 - - - K - - - acetyltransferase
COLPEBDN_00430 1.42e-244 - 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
COLPEBDN_00431 8.77e-208 metQ - - M ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
COLPEBDN_00432 3e-280 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
COLPEBDN_00433 3.64e-142 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 9.99
COLPEBDN_00434 2.49e-295 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
COLPEBDN_00435 1.29e-145 glnP2 - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00436 3.77e-157 glnP - - E ko:K02029,ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00437 2.41e-204 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATP binding protein of ABC transporter for glutamate aspartate K02028
COLPEBDN_00438 9.92e-211 glnH - - ET ko:K02030,ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
COLPEBDN_00439 7.34e-197 hflK - - O - - - prohibitin homologues
COLPEBDN_00440 1.21e-207 - - - S - - - Patatin-like phospholipase
COLPEBDN_00441 3.84e-186 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
COLPEBDN_00442 7.78e-223 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
COLPEBDN_00443 3.37e-156 - - - S - - - Vitamin K epoxide reductase
COLPEBDN_00444 1.14e-213 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
COLPEBDN_00445 1.45e-27 - - - S - - - Protein of unknown function (DUF3107)
COLPEBDN_00446 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
COLPEBDN_00447 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
COLPEBDN_00448 0.0 - - - S - - - Zincin-like metallopeptidase
COLPEBDN_00449 9.43e-233 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
COLPEBDN_00450 2.42e-96 - - - S - - - Protein of unknown function (DUF3052)
COLPEBDN_00451 1.94e-105 - - - - - - - -
COLPEBDN_00453 0.0 - - - NU - - - Tfp pilus assembly protein FimV
COLPEBDN_00454 5.92e-280 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
COLPEBDN_00455 1.48e-291 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
COLPEBDN_00456 0.0 - - - I - - - acetylesterase activity
COLPEBDN_00457 3.68e-170 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
COLPEBDN_00458 5.72e-195 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
COLPEBDN_00460 4.16e-299 - - - F - - - nucleoside hydrolase
COLPEBDN_00461 3.8e-264 - - - P - - - NMT1/THI5 like
COLPEBDN_00462 7.44e-190 - - - P - - - Binding-protein-dependent transport system inner membrane component
COLPEBDN_00463 0.0 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
COLPEBDN_00464 9.04e-316 lacY - - P ko:K02532 - ko00000,ko02000 LacY proton/sugar symporter
COLPEBDN_00465 3.28e-257 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
COLPEBDN_00466 7.04e-79 - - - S - - - Thiamine-binding protein
COLPEBDN_00467 0.0 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 - H ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COLPEBDN_00468 7.5e-125 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
COLPEBDN_00469 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
COLPEBDN_00470 3.31e-316 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
COLPEBDN_00471 7.23e-283 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
COLPEBDN_00472 2.22e-103 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
COLPEBDN_00473 1.18e-56 - - - S ko:K02221 - ko00000,ko02044 YGGT family
COLPEBDN_00474 7.28e-149 - - - V - - - DivIVA protein
COLPEBDN_00475 1.34e-127 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
COLPEBDN_00476 5.2e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
COLPEBDN_00478 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
COLPEBDN_00479 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COLPEBDN_00480 2.17e-287 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
COLPEBDN_00481 2.09e-143 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
COLPEBDN_00482 4.58e-167 - - - - - - - -
COLPEBDN_00483 2.09e-155 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
COLPEBDN_00484 3.66e-167 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
COLPEBDN_00485 1.28e-230 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
COLPEBDN_00486 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
COLPEBDN_00487 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
COLPEBDN_00488 1.27e-150 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
COLPEBDN_00489 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
COLPEBDN_00490 3.25e-225 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
COLPEBDN_00491 2.23e-212 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
COLPEBDN_00492 1.06e-165 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
COLPEBDN_00493 3.77e-14 - - - M - - - LysM domain
COLPEBDN_00494 1.85e-125 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
COLPEBDN_00495 1.59e-289 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
COLPEBDN_00496 0.0 - - - L - - - DNA helicase
COLPEBDN_00497 5.36e-111 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
COLPEBDN_00498 2.11e-249 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
COLPEBDN_00499 3.19e-119 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
COLPEBDN_00500 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
COLPEBDN_00501 9.34e-204 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
COLPEBDN_00502 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
COLPEBDN_00503 1.21e-267 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
COLPEBDN_00504 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
COLPEBDN_00505 0.0 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
COLPEBDN_00506 2.95e-206 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
COLPEBDN_00507 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
COLPEBDN_00508 2.95e-301 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
COLPEBDN_00509 3.14e-200 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
COLPEBDN_00510 5.75e-76 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
COLPEBDN_00511 1.98e-243 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00512 3.5e-272 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00513 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
COLPEBDN_00516 0.0 - - - S ko:K06904 - ko00000 Caudovirus prohead serine protease
COLPEBDN_00521 4.49e-291 - - - T - - - AAA domain
COLPEBDN_00522 3.06e-39 - - - - - - - -
COLPEBDN_00526 0.00013 - - - L - - - Helix-turn-helix domain
COLPEBDN_00528 3.23e-271 int8 - - L - - - Phage integrase family
COLPEBDN_00529 6.33e-109 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
COLPEBDN_00530 2.02e-217 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
COLPEBDN_00531 1.51e-284 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
COLPEBDN_00532 6.13e-127 - - - F - - - NUDIX domain
COLPEBDN_00533 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
COLPEBDN_00534 3.55e-192 - - - - - - - -
COLPEBDN_00535 2.34e-248 - - - T - - - Histidine kinase
COLPEBDN_00536 5.94e-149 - - - KT - - - cheY-homologous receiver domain
COLPEBDN_00537 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
COLPEBDN_00538 2e-255 - - - V - - - Acetyltransferase (GNAT) domain
COLPEBDN_00539 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
COLPEBDN_00540 2.85e-169 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
COLPEBDN_00541 1.32e-72 - - - - - - - -
COLPEBDN_00542 3.12e-253 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
COLPEBDN_00543 4.77e-229 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
COLPEBDN_00544 3.2e-116 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
COLPEBDN_00545 1.3e-264 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
COLPEBDN_00546 1.68e-193 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
COLPEBDN_00547 2.25e-136 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
COLPEBDN_00548 1.79e-34 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
COLPEBDN_00549 1.63e-82 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
COLPEBDN_00550 9.9e-214 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
COLPEBDN_00551 1.55e-194 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
COLPEBDN_00552 1.01e-200 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
COLPEBDN_00553 0.0 nanT - - U ko:K03290,ko:K08178,ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
COLPEBDN_00554 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
COLPEBDN_00555 2.34e-118 - - - - - - - -
COLPEBDN_00556 6.3e-277 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
COLPEBDN_00557 7.85e-270 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
COLPEBDN_00558 3.14e-54 - - - - - - - -
COLPEBDN_00559 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
COLPEBDN_00560 4.76e-190 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_00561 1.44e-228 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
COLPEBDN_00562 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
COLPEBDN_00563 1.48e-199 dppB - - EP ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_00564 9.25e-220 dppC - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
COLPEBDN_00565 0.0 dppD - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
COLPEBDN_00566 2.11e-153 - - - - - - - -
COLPEBDN_00567 4.59e-217 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
COLPEBDN_00568 5.41e-204 - - - S - - - Protein of unknown function (DUF3710)
COLPEBDN_00569 2.68e-176 - - - S - - - Protein of unknown function (DUF3159)
COLPEBDN_00570 0.0 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
COLPEBDN_00571 3.81e-133 - - - - - - - -
COLPEBDN_00572 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
COLPEBDN_00573 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
COLPEBDN_00574 3.99e-47 - - - - - - - -
COLPEBDN_00575 3.31e-158 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
COLPEBDN_00576 2.9e-264 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
COLPEBDN_00577 1.4e-66 - - - S - - - Protein of unknown function (DUF3073)
COLPEBDN_00578 3.73e-104 - - - I - - - Sterol carrier protein
COLPEBDN_00579 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
COLPEBDN_00580 9.18e-49 - - - - - - - -
COLPEBDN_00581 1.76e-164 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
COLPEBDN_00582 0.0 - - - L - - - ribosomal rna small subunit methyltransferase
COLPEBDN_00583 2.13e-46 crgA - - D - - - Involved in cell division
COLPEBDN_00584 1.4e-177 - - - S - - - Bacterial protein of unknown function (DUF881)
COLPEBDN_00585 1.07e-285 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
COLPEBDN_00586 7.93e-156 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
COLPEBDN_00587 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
COLPEBDN_00588 1.37e-248 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
COLPEBDN_00589 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
COLPEBDN_00590 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
COLPEBDN_00591 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
COLPEBDN_00592 2.44e-94 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
COLPEBDN_00593 1.83e-167 fhaA - - T - - - Protein of unknown function (DUF2662)
COLPEBDN_00594 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
COLPEBDN_00595 5.05e-161 - - - EG - - - EamA-like transporter family
COLPEBDN_00596 1.54e-271 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
COLPEBDN_00597 3.36e-77 - - - - - - - -
COLPEBDN_00598 1.39e-229 rrmA 2.1.1.187 - Q ko:K00563 - ko00000,ko01000,ko03009 Methyltransferase domain
COLPEBDN_00599 4.12e-47 - - - S - - - Transglycosylase associated protein
COLPEBDN_00600 4.74e-48 - - - S - - - Transglycosylase associated protein
COLPEBDN_00602 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
COLPEBDN_00603 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
COLPEBDN_00604 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
COLPEBDN_00605 6.47e-149 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
COLPEBDN_00606 0.0 - - - S ko:K07126 - ko00000 Sel1-like repeats.
COLPEBDN_00607 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
COLPEBDN_00609 1.98e-232 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
COLPEBDN_00610 6.74e-271 - - - V - - - Beta-lactamase
COLPEBDN_00611 8.61e-158 - - - E - - - SOS response associated peptidase (SRAP)
COLPEBDN_00612 4.63e-293 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
COLPEBDN_00613 2.14e-14 - - - S - - - NADPH-dependent FMN reductase
COLPEBDN_00614 8.74e-69 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
COLPEBDN_00615 2.39e-113 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
COLPEBDN_00616 0.0 - - - S - - - cellulose binding
COLPEBDN_00617 1.87e-181 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
COLPEBDN_00618 1.13e-111 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
COLPEBDN_00619 2.08e-244 - - - S ko:K06889 - ko00000 Dienelactone hydrolase family
COLPEBDN_00620 5.51e-206 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
COLPEBDN_00621 1.43e-250 - 1.1.1.91 - C ko:K05882 - ko00000,ko01000 Aldo/keto reductase family
COLPEBDN_00622 2.27e-05 - - - I - - - acetylesterase activity
COLPEBDN_00623 0.0 - - - P - - - nitric oxide dioxygenase activity
COLPEBDN_00624 1.47e-120 - - - C - - - Flavodoxin
COLPEBDN_00625 1.47e-51 - - - K - - - helix_turn_helix, mercury resistance
COLPEBDN_00626 1.97e-111 - - - C - - - Flavodoxin
COLPEBDN_00627 3.29e-189 - - - GM - - - NmrA-like family
COLPEBDN_00628 7.83e-262 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
COLPEBDN_00629 2.86e-213 - - - K - - - LysR substrate binding domain
COLPEBDN_00630 0.0 - 3.2.1.8, 3.5.1.104 - G ko:K01181,ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
COLPEBDN_00631 8.45e-249 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
COLPEBDN_00632 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
COLPEBDN_00633 3.73e-224 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COLPEBDN_00634 7.85e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COLPEBDN_00635 2.82e-306 - - - U ko:K01997,ko:K11956 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
COLPEBDN_00636 6.84e-210 livM - - U ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
COLPEBDN_00637 1.67e-202 - - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
COLPEBDN_00638 6.62e-194 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00639 1.73e-287 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
COLPEBDN_00640 1e-244 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
COLPEBDN_00641 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
COLPEBDN_00642 0.0 - - - G - - - Transporter major facilitator family protein
COLPEBDN_00643 9.6e-144 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
COLPEBDN_00644 1.8e-101 accBC3 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase C-terminal domain
COLPEBDN_00645 3.05e-234 - - - S - - - Domain of unknown function (DUF4392)
COLPEBDN_00646 0.0 scrT - - G - - - Transporter major facilitator family protein
COLPEBDN_00647 5.95e-121 - - - S - - - Acetyltransferase (GNAT) family
COLPEBDN_00648 2.26e-64 - - - S - - - Protein of unknown function (DUF1778)
COLPEBDN_00650 0.0 - - - EGP - - - Sugar (and other) transporter
COLPEBDN_00651 1.53e-258 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
COLPEBDN_00652 0.0 - 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
COLPEBDN_00653 3.67e-281 - - - E - - - GDSL-like Lipase/Acylhydrolase family
COLPEBDN_00654 0.0 bglA 3.2.1.21 - G ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
COLPEBDN_00655 2.28e-175 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 beta-mannosidase
COLPEBDN_00656 5.1e-240 - - - K - - - helix_turn _helix lactose operon repressor
COLPEBDN_00657 1.8e-144 - - - S - - - Protein of unknown function, DUF624
COLPEBDN_00658 3.02e-171 - - - - - - - -
COLPEBDN_00659 5.24e-34 - - - - - - - -
COLPEBDN_00660 0.0 - - - G - - - N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
COLPEBDN_00661 8.53e-172 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00662 1.42e-187 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
COLPEBDN_00663 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
COLPEBDN_00665 5.82e-165 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
COLPEBDN_00666 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
COLPEBDN_00667 0.0 - - - E ko:K03293 - ko00000 Amino acid permease
COLPEBDN_00668 1.08e-43 - - - V ko:K02004 - ko00000,ko00002,ko02000 efflux transmembrane transporter activity
COLPEBDN_00670 0.0 - - - M - - - MacB-like periplasmic core domain
COLPEBDN_00671 8.06e-96 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_00672 7.97e-137 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
COLPEBDN_00673 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_00674 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
COLPEBDN_00675 0.0 - 3.5.1.104 - G ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
COLPEBDN_00676 5.42e-158 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
COLPEBDN_00677 6.76e-151 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
COLPEBDN_00678 1.34e-98 - - - - - - - -
COLPEBDN_00679 1.16e-292 livK - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
COLPEBDN_00680 2.75e-136 - - - K - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_00681 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
COLPEBDN_00682 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
COLPEBDN_00683 2.58e-139 - - - S ko:K16926 - ko00000,ko00002,ko02000 Hypothetical bacterial integral membrane protein (Trep_Strep)
COLPEBDN_00684 7.69e-171 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
COLPEBDN_00685 0.0 - - - G ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00686 2.93e-230 - - - P ko:K02077,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
COLPEBDN_00687 6.48e-213 - - - S - - - esterase of the alpha-beta hydrolase superfamily
COLPEBDN_00688 9.61e-43 - - - K - - - transcriptional regulator
COLPEBDN_00689 6.61e-147 - - - - - - - -
COLPEBDN_00691 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
COLPEBDN_00692 7.53e-156 icaR - - K - - - Bacterial regulatory proteins, tetR family
COLPEBDN_00693 1.95e-301 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
COLPEBDN_00694 1.79e-300 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
COLPEBDN_00695 6.28e-73 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
COLPEBDN_00696 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
COLPEBDN_00697 3.38e-51 - - - K - - - sequence-specific DNA binding
COLPEBDN_00698 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
COLPEBDN_00699 0.0 murE - - M - - - Domain of unknown function (DUF1727)
COLPEBDN_00700 6.15e-183 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
COLPEBDN_00701 3.85e-69 - - - S - - - granule-associated protein
COLPEBDN_00702 0.0 - - - S ko:K03688 - ko00000 ABC1 family
COLPEBDN_00703 3.02e-254 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
COLPEBDN_00704 5.67e-151 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
COLPEBDN_00705 2.45e-168 - - - - - - - -
COLPEBDN_00706 5.22e-262 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
COLPEBDN_00707 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
COLPEBDN_00708 3.59e-95 - - - D - - - bacterial-type flagellum organization
COLPEBDN_00709 2.01e-291 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
COLPEBDN_00710 3.09e-151 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
COLPEBDN_00711 3.93e-143 - - - U - - - Type II secretion system (T2SS), protein F
COLPEBDN_00712 4.93e-52 - - - S - - - Protein of unknown function (DUF4244)
COLPEBDN_00713 5.66e-74 - - - U - - - TadE-like protein
COLPEBDN_00714 6.12e-98 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
COLPEBDN_00715 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
COLPEBDN_00716 8.17e-141 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
COLPEBDN_00717 2.52e-173 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
COLPEBDN_00718 5.79e-126 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
COLPEBDN_00719 2.38e-252 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
COLPEBDN_00720 1.7e-155 - - - - - - - -
COLPEBDN_00721 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
COLPEBDN_00724 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
COLPEBDN_00725 0.0 lysI - - E ko:K03758 - ko00000,ko02000 Amino acid permease
COLPEBDN_00726 1.13e-150 - - - - - - - -
COLPEBDN_00727 3.18e-41 - - - - - - - -
COLPEBDN_00728 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
COLPEBDN_00729 0.0 - - - EGP ko:K18926 - ko00000,ko00002,ko02000 Major Facilitator Superfamily
COLPEBDN_00730 3.33e-149 pspA - - KT ko:K03969 - ko00000 PspA/IM30 family
COLPEBDN_00731 8.06e-315 - - - S - - - COG1512 Beta-propeller domains of methanol dehydrogenase type
COLPEBDN_00732 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
COLPEBDN_00733 3.48e-33 - - - - - - - -
COLPEBDN_00734 1.7e-188 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
COLPEBDN_00735 5.39e-62 - - - - - - - -
COLPEBDN_00736 2.3e-22 - - - - - - - -
COLPEBDN_00737 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
COLPEBDN_00738 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_00739 6.41e-127 - - - K - - - MarR family
COLPEBDN_00740 2.28e-132 - - - S - - - NADPH-dependent FMN reductase
COLPEBDN_00741 1.31e-129 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
COLPEBDN_00744 6.34e-66 - - - - - - - -
COLPEBDN_00745 4.02e-265 - - - - ko:K19133 - ko00000,ko02048 -
COLPEBDN_00746 0.0 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated helicase Cas3
COLPEBDN_00747 0.0 - - - - ko:K19132 - ko00000,ko02048 -
COLPEBDN_00748 5.26e-284 - - - S ko:K19131 - ko00000,ko02048 CRISPR-associated protein GSU0053 (Cas_GSU0053)
COLPEBDN_00749 7.49e-24 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR associated protein Cas2
COLPEBDN_00750 0.0 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
COLPEBDN_00751 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
COLPEBDN_00752 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
COLPEBDN_00753 8.85e-131 - - - S - - - Protein of unknown function (DUF1211)
COLPEBDN_00754 5.83e-78 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
COLPEBDN_00755 3.76e-183 - - - - - - - -
COLPEBDN_00756 2.07e-190 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
COLPEBDN_00757 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
COLPEBDN_00758 1.04e-305 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
COLPEBDN_00759 4.21e-60 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
COLPEBDN_00760 7.29e-244 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
COLPEBDN_00762 5.11e-165 tmp1 - - S - - - Domain of unknown function (DUF4391)
COLPEBDN_00763 2.09e-217 aspB 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
COLPEBDN_00764 1.34e-130 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
COLPEBDN_00765 0.0 - - - S - - - zinc finger
COLPEBDN_00766 0.0 - - - L - - - Psort location Cytoplasmic, score
COLPEBDN_00767 1.64e-162 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
COLPEBDN_00768 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COLPEBDN_00769 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
COLPEBDN_00770 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
COLPEBDN_00771 3.72e-212 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
COLPEBDN_00772 7.91e-173 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
COLPEBDN_00773 0.0 - - - G - - - Major Facilitator Superfamily
COLPEBDN_00774 2.04e-171 - - - K - - - -acetyltransferase
COLPEBDN_00775 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
COLPEBDN_00776 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
COLPEBDN_00777 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
COLPEBDN_00778 0.0 - - - S - - - Fibronectin type 3 domain
COLPEBDN_00779 9.88e-163 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
COLPEBDN_00780 3.4e-266 - - - S - - - Protein of unknown function DUF58
COLPEBDN_00781 0.0 - - - E - - - Transglutaminase-like superfamily
COLPEBDN_00782 5.62e-135 - - - B - - - Belongs to the OprB family
COLPEBDN_00783 1.49e-138 - - - T - - - Forkhead associated domain
COLPEBDN_00784 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COLPEBDN_00785 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COLPEBDN_00786 2.17e-68 - - - - - - - -
COLPEBDN_00787 5.51e-239 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
COLPEBDN_00788 3.3e-165 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
COLPEBDN_00789 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
COLPEBDN_00790 1.69e-57 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
COLPEBDN_00791 1.45e-192 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
COLPEBDN_00793 3.52e-295 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
COLPEBDN_00794 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
COLPEBDN_00795 5.19e-184 - - - K - - - DeoR C terminal sensor domain
COLPEBDN_00796 9.89e-143 ppm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase family 2
COLPEBDN_00797 2.16e-282 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
COLPEBDN_00798 2.6e-282 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
COLPEBDN_00799 0.0 pon1 - - M - - - Transglycosylase
COLPEBDN_00800 1.64e-178 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
COLPEBDN_00801 5.28e-283 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
COLPEBDN_00802 5.69e-105 - - - J - - - TM2 domain
COLPEBDN_00803 1.84e-28 - - - - - - - -
COLPEBDN_00804 1.06e-220 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
COLPEBDN_00805 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
COLPEBDN_00806 0.0 - - - S - - - Uncharacterized conserved protein (DUF2183)
COLPEBDN_00807 5.74e-94 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
COLPEBDN_00808 2.11e-273 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
COLPEBDN_00809 3.34e-220 - - - I - - - Alpha/beta hydrolase family
COLPEBDN_00810 1.17e-109 - - - F - - - Domain of unknown function (DUF4916)
COLPEBDN_00811 1.18e-86 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
COLPEBDN_00812 3.66e-241 - - - S ko:K21688 - ko00000 G5
COLPEBDN_00813 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COLPEBDN_00814 1.57e-100 - - - - - - - -
COLPEBDN_00815 0.0 - - - S - - - Predicted membrane protein (DUF2142)
COLPEBDN_00816 3.45e-239 - - - M - - - Glycosyl transferase family 2
COLPEBDN_00817 0.0 - - - S - - - Protein of unknown function (DUF4012)
COLPEBDN_00818 8.58e-218 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
COLPEBDN_00819 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
COLPEBDN_00820 1.28e-263 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
COLPEBDN_00821 4.52e-237 - - - M - - - Glycosyl transferase family 2
COLPEBDN_00822 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
COLPEBDN_00823 6.8e-219 - - - S - - - Glycosyl transferase family 2
COLPEBDN_00824 4.03e-245 - 2.7.8.12 GT2 S ko:K09809,ko:K19427 - ko00000,ko01000 Glycosyltransferase like family 2
COLPEBDN_00825 0.0 - - - - - - - -
COLPEBDN_00826 6.81e-220 - - GT2 S ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase family 2
COLPEBDN_00827 9.26e-187 - - - M - - - Domain of unknown function (DUF4422)
COLPEBDN_00828 1.34e-210 - - GT2 S ko:K12992 ko02025,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyltransferase like family 2
COLPEBDN_00829 3.61e-234 - - - M - - - Capsular polysaccharide synthesis protein
COLPEBDN_00830 5.09e-302 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 UDP binding domain
COLPEBDN_00831 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
COLPEBDN_00832 1.53e-252 - - - M - - - transferase activity, transferring glycosyl groups
COLPEBDN_00833 4.92e-208 - - - S - - - Glycosyl transferase family 2
COLPEBDN_00834 0.0 - - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COLPEBDN_00835 2.01e-65 - - - - - - - -
COLPEBDN_00836 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
COLPEBDN_00837 6.59e-310 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
COLPEBDN_00838 1.3e-174 - - - L - - - Protein of unknown function (DUF1524)
COLPEBDN_00839 2.31e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
COLPEBDN_00840 2.15e-153 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
COLPEBDN_00841 2.14e-282 - - - M - - - epimerase dehydratase
COLPEBDN_00842 6.41e-111 - - - M - - - Oligosaccharide biosynthesis protein Alg14 like
COLPEBDN_00843 1.84e-119 - - - M - - - Glycosyltransferase family 28 C-terminal domain
COLPEBDN_00844 6.67e-237 - - - S - - - Glycosyl transferase family 2
COLPEBDN_00845 5.53e-205 - - GT2 S ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase family 2
COLPEBDN_00846 8.76e-261 - - - S - - - EpsG family
COLPEBDN_00847 0.0 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
COLPEBDN_00848 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
COLPEBDN_00849 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
COLPEBDN_00850 1.13e-132 etp 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Low molecular weight phosphatase family
COLPEBDN_00851 0.0 - - - S - - - Protein of unknown function (DUF4012)
COLPEBDN_00852 0.0 wcoI - - DM - - - Psort location CytoplasmicMembrane, score
COLPEBDN_00853 6.14e-110 - - - - - - - -
COLPEBDN_00854 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COLPEBDN_00857 0.0 - - - S - - - Calcineurin-like phosphoesterase
COLPEBDN_00858 1.96e-186 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
COLPEBDN_00859 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
COLPEBDN_00860 8.41e-165 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
COLPEBDN_00861 5.98e-55 - - - K - - - Lrp/AsnC ligand binding domain
COLPEBDN_00862 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
COLPEBDN_00863 4.71e-316 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
COLPEBDN_00864 1.57e-202 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
COLPEBDN_00865 1.02e-202 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
COLPEBDN_00866 2.54e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
COLPEBDN_00868 3.07e-178 - - - S - - - Domain of unknown function (DUF4854)
COLPEBDN_00869 1.65e-236 - - - S - - - CAAX protease self-immunity
COLPEBDN_00870 2.29e-186 - - - M - - - Mechanosensitive ion channel
COLPEBDN_00871 9.92e-149 - - - K - - - Bacterial regulatory proteins, tetR family
COLPEBDN_00872 5.91e-297 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_00873 1.12e-209 - - - S - - - Putative ABC-transporter type IV
COLPEBDN_00874 1.27e-291 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
COLPEBDN_00875 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_00876 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_00877 3.96e-253 - - - G - - - pfkB family carbohydrate kinase
COLPEBDN_00878 3.36e-42 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
COLPEBDN_00879 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
COLPEBDN_00880 0.0 - - - M - - - Spy0128-like isopeptide containing domain
COLPEBDN_00881 1.17e-131 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
COLPEBDN_00882 1.47e-203 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
COLPEBDN_00883 7.44e-155 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
COLPEBDN_00884 4.08e-62 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
COLPEBDN_00885 8.95e-94 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
COLPEBDN_00886 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
COLPEBDN_00887 8.36e-283 - - - S - - - Endonuclease/Exonuclease/phosphatase family
COLPEBDN_00888 1.62e-205 - - - P - - - Cation efflux family
COLPEBDN_00889 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
COLPEBDN_00890 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
COLPEBDN_00891 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
COLPEBDN_00892 6.62e-176 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
COLPEBDN_00893 1.08e-119 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
COLPEBDN_00894 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
COLPEBDN_00895 3.18e-181 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
COLPEBDN_00896 4.3e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
COLPEBDN_00897 1.08e-144 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
COLPEBDN_00898 1.03e-156 - - - - - - - -
COLPEBDN_00899 2.39e-113 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COLPEBDN_00900 2.64e-67 - - - S - - - Protein of unknown function (DUF3039)
COLPEBDN_00901 1.73e-248 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
COLPEBDN_00902 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
COLPEBDN_00903 8.13e-59 - - - - - - - -
COLPEBDN_00904 1.69e-174 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
COLPEBDN_00905 2.59e-170 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
COLPEBDN_00906 2.98e-313 - - - V ko:K12554 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Psort location Cytoplasmic, score 8.87
COLPEBDN_00907 3.86e-236 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
COLPEBDN_00910 4.94e-287 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Mannose-6-phosphate isomerase
COLPEBDN_00911 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
COLPEBDN_00912 1.67e-79 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
COLPEBDN_00913 3.61e-175 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
COLPEBDN_00914 5.07e-185 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
COLPEBDN_00915 1.28e-229 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_00916 0.0 - - - V - - - Efflux ABC transporter, permease protein
COLPEBDN_00917 3.25e-155 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
COLPEBDN_00918 5.31e-295 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
COLPEBDN_00919 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
COLPEBDN_00920 7.1e-62 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
COLPEBDN_00921 1.23e-52 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
COLPEBDN_00922 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
COLPEBDN_00923 1.76e-261 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
COLPEBDN_00924 2.39e-295 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
COLPEBDN_00926 5.51e-46 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
COLPEBDN_00927 3.74e-204 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
COLPEBDN_00928 3.53e-92 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
COLPEBDN_00929 2.3e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
COLPEBDN_00930 8.38e-188 - - - QT - - - PucR C-terminal helix-turn-helix domain
COLPEBDN_00931 2.36e-216 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
COLPEBDN_00932 4.06e-134 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
COLPEBDN_00933 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
COLPEBDN_00934 0.0 pccB - - I - - - Carboxyl transferase domain
COLPEBDN_00935 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
COLPEBDN_00936 1.39e-102 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COLPEBDN_00938 4.41e-156 - - - - - - - -
COLPEBDN_00939 2.28e-238 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
COLPEBDN_00940 2.28e-65 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
COLPEBDN_00941 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
COLPEBDN_00942 2.65e-128 lemA - - S ko:K03744 - ko00000 LemA family
COLPEBDN_00943 0.0 - - - S - - - Predicted membrane protein (DUF2207)
COLPEBDN_00944 2.7e-237 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
COLPEBDN_00945 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
COLPEBDN_00946 2.38e-100 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
COLPEBDN_00947 7.35e-28 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
COLPEBDN_00948 5.57e-214 - - - C - - - Oxidoreductase, aldo keto reductase family protein
COLPEBDN_00949 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
COLPEBDN_00950 1.79e-288 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
COLPEBDN_00951 3.41e-193 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
COLPEBDN_00952 2.7e-172 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
COLPEBDN_00953 3.73e-192 - - - D - - - nuclear chromosome segregation
COLPEBDN_00954 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
COLPEBDN_00955 8.35e-279 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
COLPEBDN_00956 0.0 - - - I - - - Psort location CytoplasmicMembrane, score 9.99
COLPEBDN_00957 1.15e-305 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
COLPEBDN_00958 2.15e-155 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
COLPEBDN_00959 1.85e-280 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
COLPEBDN_00960 1.32e-168 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
COLPEBDN_00961 3.8e-262 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
COLPEBDN_00962 2.63e-218 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
COLPEBDN_00963 1.53e-221 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
COLPEBDN_00964 1.51e-188 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
COLPEBDN_00965 0.0 - - - S ko:K06901 - ko00000,ko02000 Permease family
COLPEBDN_00966 2.41e-210 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
COLPEBDN_00967 2.13e-114 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
COLPEBDN_00968 9.38e-68 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
COLPEBDN_00969 0.0 - - - T - - - Forkhead associated domain
COLPEBDN_00970 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
COLPEBDN_00971 2.19e-52 - - - - - - - -
COLPEBDN_00972 8.73e-132 - - - NO - - - SAF
COLPEBDN_00973 1.76e-43 - - - S - - - Putative regulatory protein
COLPEBDN_00974 1.84e-177 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
COLPEBDN_00975 1.59e-103 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
COLPEBDN_00976 1.73e-257 - - - - - - - -
COLPEBDN_00977 4.55e-64 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
COLPEBDN_00981 2.06e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
COLPEBDN_00982 2.74e-302 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
COLPEBDN_00983 0.0 - - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
COLPEBDN_00984 4.15e-80 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
COLPEBDN_00985 7.49e-282 dapC - - E - - - Aminotransferase class I and II
COLPEBDN_00986 0.0 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
COLPEBDN_00988 1e-243 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
COLPEBDN_00989 3.01e-147 yigZ - - S - - - Uncharacterized protein family UPF0029
COLPEBDN_00990 1.73e-157 - - - - - - - -
COLPEBDN_00991 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
COLPEBDN_00992 1.31e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
COLPEBDN_00993 6.69e-97 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
COLPEBDN_00994 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
COLPEBDN_00995 1.65e-267 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
COLPEBDN_00996 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
COLPEBDN_00997 3.9e-244 - - - K - - - Psort location Cytoplasmic, score
COLPEBDN_00998 3.06e-198 - - - S - - - YwiC-like protein
COLPEBDN_00999 6.58e-68 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
COLPEBDN_01000 1.06e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
COLPEBDN_01001 3.41e-151 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
COLPEBDN_01002 1.79e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
COLPEBDN_01003 2.32e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
COLPEBDN_01004 6.95e-63 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
COLPEBDN_01005 2.68e-75 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
COLPEBDN_01006 2.32e-176 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
COLPEBDN_01007 1.15e-99 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
COLPEBDN_01008 5.27e-49 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
COLPEBDN_01009 7.84e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
COLPEBDN_01010 5.15e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
COLPEBDN_01011 4.44e-68 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
COLPEBDN_01012 1.94e-136 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
COLPEBDN_01013 4.97e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
COLPEBDN_01014 9.65e-91 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
COLPEBDN_01015 6.61e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
COLPEBDN_01016 5.96e-77 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
COLPEBDN_01017 6.25e-132 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
COLPEBDN_01018 1.75e-33 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
COLPEBDN_01019 3.98e-100 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
COLPEBDN_01020 0.0 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
COLPEBDN_01021 4.41e-131 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
COLPEBDN_01022 4.86e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
COLPEBDN_01023 1.03e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
COLPEBDN_01024 1.17e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
COLPEBDN_01025 1.73e-84 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
COLPEBDN_01026 1.4e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COLPEBDN_01027 1.16e-92 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
COLPEBDN_01028 6.34e-190 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
COLPEBDN_01030 5.94e-208 - - - - - - - -
COLPEBDN_01031 6.28e-249 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
COLPEBDN_01032 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
COLPEBDN_01033 5.79e-122 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
COLPEBDN_01034 5.82e-250 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
COLPEBDN_01035 9.91e-302 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
COLPEBDN_01036 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
COLPEBDN_01037 1.12e-128 - - - - - - - -
COLPEBDN_01038 5.05e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
COLPEBDN_01039 2.05e-164 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
COLPEBDN_01040 7.54e-240 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
COLPEBDN_01042 2.27e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
COLPEBDN_01043 1.69e-278 - - - I - - - Diacylglycerol kinase catalytic domain
COLPEBDN_01044 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
COLPEBDN_01045 0.0 - - - S ko:K06889 - ko00000 alpha beta
COLPEBDN_01046 5.96e-146 - - - S - - - Protein of unknown function (DUF4125)
COLPEBDN_01047 0.0 - - - S - - - Domain of unknown function (DUF4037)
COLPEBDN_01048 8.64e-163 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
COLPEBDN_01049 0.0 tcsS3 - - KT - - - PspC domain
COLPEBDN_01050 0.0 pspC - - KT - - - PspC domain
COLPEBDN_01051 5.45e-146 - - - - - - - -
COLPEBDN_01052 2.09e-286 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
COLPEBDN_01053 2.38e-168 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
COLPEBDN_01054 1.71e-38 - - - E - - - Cys/Met metabolism PLP-dependent enzyme
COLPEBDN_01056 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
COLPEBDN_01057 1.71e-186 - - - - - - - -
COLPEBDN_01058 0.0 - - - E - - - Phospholipase B
COLPEBDN_01059 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
COLPEBDN_01060 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Amino acid permease
COLPEBDN_01061 0.0 - - - E - - - Serine carboxypeptidase
COLPEBDN_01062 0.0 - - - E - - - Amino acid permease
COLPEBDN_01063 1.05e-101 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
COLPEBDN_01064 2.91e-179 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COLPEBDN_01065 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
COLPEBDN_01066 1.62e-84 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
COLPEBDN_01067 4.64e-159 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 Zinc-binding dehydrogenase
COLPEBDN_01068 0.0 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphomannose isomerase type I
COLPEBDN_01069 2.41e-29 - - - - - - - -
COLPEBDN_01070 1.87e-288 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
COLPEBDN_01071 4.13e-156 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
COLPEBDN_01072 2.42e-268 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
COLPEBDN_01073 1.91e-228 - - - S - - - CHAP domain
COLPEBDN_01074 1.42e-140 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
COLPEBDN_01075 8.87e-252 - - - T - - - Universal stress protein family
COLPEBDN_01076 1.07e-94 - - - O - - - OsmC-like protein
COLPEBDN_01077 1.12e-223 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
COLPEBDN_01078 1.46e-170 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
COLPEBDN_01079 1.04e-129 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
COLPEBDN_01080 9.11e-256 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
COLPEBDN_01081 5.36e-206 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
COLPEBDN_01083 3.21e-245 - - - S - - - DUF218 domain
COLPEBDN_01084 1.78e-239 - 3.1.3.5 - S ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase
COLPEBDN_01085 1.95e-139 - - - - - - - -
COLPEBDN_01086 0.0 - - - L ko:K07459 - ko00000 AAA ATPase domain
COLPEBDN_01088 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2130)
COLPEBDN_01089 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_01090 1.89e-187 - - - S - - - Domain of unknown function (DUF4194)
COLPEBDN_01091 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_01092 7.2e-302 - - - S - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_01094 2.83e-84 - - - K - - - Protein of unknown function, DUF488
COLPEBDN_01095 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
COLPEBDN_01096 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
COLPEBDN_01097 3.44e-237 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
COLPEBDN_01098 7.35e-152 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
COLPEBDN_01099 2.76e-80 - - - - - - - -
COLPEBDN_01100 8.48e-132 - - - S - - - Domain of unknown function (DUF4190)
COLPEBDN_01101 5.97e-106 - - - S - - - Domain of unknown function (DUF4190)
COLPEBDN_01102 2.28e-260 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
COLPEBDN_01103 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
COLPEBDN_01104 7.36e-225 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
COLPEBDN_01105 4.97e-225 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_01106 2.41e-239 - - - K - - - Periplasmic binding protein domain
COLPEBDN_01110 5.74e-241 - - - M - - - Glycosyltransferase like family 2
COLPEBDN_01111 0.0 - - - S - - - AI-2E family transporter
COLPEBDN_01112 2.55e-307 - - - M - - - Glycosyl transferase family 21
COLPEBDN_01113 1.78e-207 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01114 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
COLPEBDN_01115 8.49e-301 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
COLPEBDN_01116 5e-274 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
COLPEBDN_01117 2.77e-128 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
COLPEBDN_01118 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
COLPEBDN_01119 3.66e-186 folK 2.7.6.3, 4.1.2.25 - H ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
COLPEBDN_01120 7.39e-148 - - - S - - - Protein of unknown function (DUF3180)
COLPEBDN_01121 4.03e-221 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
COLPEBDN_01122 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
COLPEBDN_01123 4.14e-91 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
COLPEBDN_01124 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
COLPEBDN_01125 6.02e-145 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
COLPEBDN_01126 5.11e-184 - - - - - - - -
COLPEBDN_01128 4.11e-223 - - - - - - - -
COLPEBDN_01129 5.27e-195 - - - S - - - Protein of unknown function DUF262
COLPEBDN_01130 9.39e-149 - - - K - - - helix_turn_helix, Lux Regulon
COLPEBDN_01131 2.19e-271 - - - T - - - Histidine kinase
COLPEBDN_01132 1.62e-236 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01133 1.71e-301 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
COLPEBDN_01134 3.98e-295 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
COLPEBDN_01135 6.82e-254 - 1.4.1.12, 1.4.1.26 - S ko:K21672 ko00310,ko00330,ko00472,map00310,map00330,map00472 ko00000,ko00001,ko01000 Dihydrodipicolinate reductase, N-terminus
COLPEBDN_01137 3.69e-184 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
COLPEBDN_01138 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
COLPEBDN_01139 4.34e-247 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
COLPEBDN_01140 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
COLPEBDN_01141 8.42e-156 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
COLPEBDN_01142 1.92e-144 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
COLPEBDN_01143 6.75e-113 - - - K - - - Helix-turn-helix XRE-family like proteins
COLPEBDN_01144 1.78e-58 - - - S - - - Protein of unknown function (DUF3046)
COLPEBDN_01145 6.98e-265 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
COLPEBDN_01146 2.43e-147 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
COLPEBDN_01148 1.82e-160 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
COLPEBDN_01149 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
COLPEBDN_01150 3.49e-247 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
COLPEBDN_01151 7.66e-127 - - - - - - - -
COLPEBDN_01152 1.73e-178 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
COLPEBDN_01153 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
COLPEBDN_01154 7.37e-259 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
COLPEBDN_01155 8.16e-167 - - - - - - - -
COLPEBDN_01156 2.66e-264 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
COLPEBDN_01157 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
COLPEBDN_01158 1.21e-288 - 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferase 4-like domain
COLPEBDN_01159 5.36e-282 - - - G - - - Major Facilitator Superfamily
COLPEBDN_01161 2.31e-56 - - - G - - - Major facilitator superfamily
COLPEBDN_01162 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
COLPEBDN_01163 2.47e-222 - - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
COLPEBDN_01164 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
COLPEBDN_01165 9.9e-274 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
COLPEBDN_01166 3.68e-312 - - - S - - - Protein of unknown function (DUF3071)
COLPEBDN_01167 1.42e-62 - - - S - - - Domain of unknown function (DUF4193)
COLPEBDN_01168 4.9e-108 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
COLPEBDN_01169 1.48e-173 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
COLPEBDN_01170 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
COLPEBDN_01171 4.86e-134 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
COLPEBDN_01172 2.68e-232 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
COLPEBDN_01173 6.49e-304 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
COLPEBDN_01174 3.75e-155 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_01175 1.09e-288 - - - S - - - Peptidase dimerisation domain
COLPEBDN_01176 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
COLPEBDN_01177 2.17e-43 - - - - - - - -
COLPEBDN_01178 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
COLPEBDN_01179 6.98e-224 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
COLPEBDN_01180 0.0 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
COLPEBDN_01181 6.03e-306 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
COLPEBDN_01182 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
COLPEBDN_01183 3.08e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
COLPEBDN_01184 5.41e-160 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
COLPEBDN_01185 0.0 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
COLPEBDN_01188 2.54e-311 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
COLPEBDN_01189 0.0 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
COLPEBDN_01190 1.06e-192 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
COLPEBDN_01191 2.13e-157 safC - - S - - - O-methyltransferase
COLPEBDN_01192 1.36e-234 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
COLPEBDN_01193 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
COLPEBDN_01194 1.44e-277 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
COLPEBDN_01195 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
COLPEBDN_01196 1.89e-114 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
COLPEBDN_01197 1.2e-211 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
COLPEBDN_01198 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
COLPEBDN_01200 0.0 ykoD - - P ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
COLPEBDN_01201 1.68e-136 ecfT - - P ko:K02008,ko:K16783,ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 transmembrane transporter activity
COLPEBDN_01202 2.32e-219 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_01203 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
COLPEBDN_01204 3.72e-154 - - - K - - - helix_turn_helix, Lux Regulon
COLPEBDN_01205 0.0 - - - T - - - Histidine kinase
COLPEBDN_01206 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
COLPEBDN_01207 4.3e-186 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
COLPEBDN_01208 2.17e-256 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
COLPEBDN_01209 1.32e-76 - - - S - - - Cupin 2, conserved barrel domain protein
COLPEBDN_01210 9.64e-47 - - - - - - - -
COLPEBDN_01211 1.66e-273 - - - I - - - Hydrolase, alpha beta domain protein
COLPEBDN_01212 0.0 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
COLPEBDN_01213 2.85e-255 - - - S - - - Conserved hypothetical protein 698
COLPEBDN_01214 0.0 - - - JKL - - - helicase superfamily c-terminal domain
COLPEBDN_01215 1.53e-189 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
COLPEBDN_01216 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
COLPEBDN_01217 2.17e-247 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COLPEBDN_01218 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
COLPEBDN_01219 2.15e-22 M1-966 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Belongs to the peptidase S51 family
COLPEBDN_01220 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
COLPEBDN_01221 9.91e-189 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
COLPEBDN_01222 5.42e-232 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
COLPEBDN_01223 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
COLPEBDN_01224 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
COLPEBDN_01225 6.85e-54 - - - P ko:K04758 - ko00000,ko02000 FeoA
COLPEBDN_01226 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
COLPEBDN_01227 3.72e-105 - - - F - - - Nucleoside 2-deoxyribosyltransferase
COLPEBDN_01228 1.2e-116 - - - K - - - Winged helix DNA-binding domain
COLPEBDN_01230 7.43e-130 - - - S - - - AAA domain, putative AbiEii toxin, Type IV TA system
COLPEBDN_01231 8.43e-94 - - - V ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 (ABC) transporter
COLPEBDN_01232 2.88e-43 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
COLPEBDN_01233 0.0 cstA - - T ko:K06200 - ko00000 5TM C-terminal transporter carbon starvation CstA
COLPEBDN_01234 5.3e-22 - - - S - - - Selenoprotein, putative
COLPEBDN_01235 9.99e-300 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
COLPEBDN_01236 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
COLPEBDN_01237 7.24e-142 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
COLPEBDN_01238 3.18e-133 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
COLPEBDN_01239 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
COLPEBDN_01241 3.28e-165 ssuB - - P ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01242 1.14e-224 - - - P ko:K15553 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 NMT1-like family
COLPEBDN_01243 3.38e-209 - - - U ko:K15554 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_01244 8.66e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
COLPEBDN_01245 3.48e-128 - - - D - - - Septum formation initiator
COLPEBDN_01246 2.96e-144 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
COLPEBDN_01247 2.94e-238 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
COLPEBDN_01249 1.24e-136 - - - - - - - -
COLPEBDN_01250 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
COLPEBDN_01251 2.24e-97 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
COLPEBDN_01252 3.4e-105 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
COLPEBDN_01253 6.93e-193 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
COLPEBDN_01254 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
COLPEBDN_01255 5.33e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
COLPEBDN_01256 1.17e-313 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
COLPEBDN_01257 8.99e-234 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
COLPEBDN_01258 0.0 yvhJ - - K - - - Cell envelope-related transcriptional attenuator domain
COLPEBDN_01259 0.0 - - - S - - - Glycosyl transferase, family 2
COLPEBDN_01260 0.0 - - - - - - - -
COLPEBDN_01261 1.6e-72 - - - S - - - Zincin-like metallopeptidase
COLPEBDN_01262 1.75e-197 - - - T - - - Eukaryotic phosphomannomutase
COLPEBDN_01263 3.71e-187 pyrE_1 - - S - - - Phosphoribosyl transferase domain
COLPEBDN_01264 8.38e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
COLPEBDN_01265 3.21e-168 cseB - - T - - - Response regulator receiver domain protein
COLPEBDN_01266 4.67e-296 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
COLPEBDN_01268 1.02e-132 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
COLPEBDN_01269 7.88e-116 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
COLPEBDN_01270 2.27e-185 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
COLPEBDN_01271 4.24e-217 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01272 1.26e-236 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
COLPEBDN_01273 3.33e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COLPEBDN_01274 4.47e-315 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
COLPEBDN_01275 1.4e-152 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
COLPEBDN_01276 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
COLPEBDN_01277 5.79e-230 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
COLPEBDN_01278 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
COLPEBDN_01280 6.77e-153 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
COLPEBDN_01281 7.75e-158 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
COLPEBDN_01283 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
COLPEBDN_01284 3.04e-235 - - - L - - - NIF3 (NGG1p interacting factor 3)
COLPEBDN_01285 3.06e-158 - - - L - - - NUDIX domain
COLPEBDN_01286 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
COLPEBDN_01287 1.05e-295 - - - - - - - -
COLPEBDN_01289 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
COLPEBDN_01290 4.94e-297 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
COLPEBDN_01291 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
COLPEBDN_01292 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
COLPEBDN_01293 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
COLPEBDN_01294 4.41e-92 - - - K - - - sequence-specific DNA binding
COLPEBDN_01295 5.18e-228 - - - L ko:K07481 - ko00000 Transposase domain (DUF772)
COLPEBDN_01296 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
COLPEBDN_01297 8.85e-85 - - - S ko:K07133 - ko00000 AAA domain
COLPEBDN_01298 3.03e-140 - - - F - - - adenylate kinase activity
COLPEBDN_01299 1.82e-93 - - - K - - - Acetyltransferase (GNAT) family
COLPEBDN_01300 6.73e-207 - - - E - - - -acetyltransferase
COLPEBDN_01301 1.23e-67 - 4.2.99.21 - E ko:K04782 ko01053,ko01110,ko01130,map01053,map01110,map01130 ko00000,ko00001,ko01000 Chorismate mutase type II
COLPEBDN_01302 3.44e-182 - - - - - - - -
COLPEBDN_01303 1.88e-214 add1 3.5.4.4 - F ko:K01488 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko01000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
COLPEBDN_01304 5.23e-244 - - - K - - - Helix-turn-helix XRE-family like proteins
COLPEBDN_01305 1.42e-86 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
COLPEBDN_01306 2.02e-214 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01307 1.89e-133 - - - S - - - ABC-2 family transporter protein
COLPEBDN_01308 1.63e-110 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
COLPEBDN_01309 1.07e-181 - - - S ko:K07010 - ko00000,ko01002 Peptidase C26
COLPEBDN_01310 0.0 - 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Glycosyl hydrolase family 70
COLPEBDN_01311 5.4e-239 - - - K - - - TRANSCRIPTIONal
COLPEBDN_01312 1.51e-226 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
COLPEBDN_01313 6.73e-26 - 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
COLPEBDN_01314 1.5e-151 - - - M - - - Protein of unknown function (DUF3737)
COLPEBDN_01315 0.0 pbuX - - F ko:K03458 - ko00000 Permease family
COLPEBDN_01316 8.71e-119 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
COLPEBDN_01317 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
COLPEBDN_01318 3.61e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
COLPEBDN_01319 2.01e-81 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
COLPEBDN_01320 7.34e-165 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
COLPEBDN_01321 1.31e-84 - - - S - - - Bacterial protein of unknown function (DUF948)
COLPEBDN_01322 6.54e-46 - - - - - - - -
COLPEBDN_01323 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
COLPEBDN_01324 3.78e-112 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
COLPEBDN_01325 2.13e-264 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
COLPEBDN_01327 1.45e-280 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
COLPEBDN_01328 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
COLPEBDN_01329 2.03e-92 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
COLPEBDN_01330 1.64e-242 - - - - - - - -
COLPEBDN_01331 2.23e-105 - - - - - - - -
COLPEBDN_01332 1.78e-105 - - - - - - - -
COLPEBDN_01333 1.49e-286 - - - - - - - -
COLPEBDN_01334 6.74e-281 - - - - - - - -
COLPEBDN_01337 7.78e-125 - 3.2.1.1, 3.2.1.41 CBM48,GH13 G ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
COLPEBDN_01338 2.25e-109 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
COLPEBDN_01339 4.16e-236 pulA 3.2.1.41, 3.2.1.68 CBM48,GH13 G ko:K01200,ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
COLPEBDN_01340 3.78e-73 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
COLPEBDN_01341 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
COLPEBDN_01342 0.0 - - - S - - - L,D-transpeptidase catalytic domain
COLPEBDN_01343 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
COLPEBDN_01344 8.08e-300 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
COLPEBDN_01345 8.04e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
COLPEBDN_01346 2.17e-305 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
COLPEBDN_01347 3.17e-135 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
COLPEBDN_01348 5.86e-121 - - - S - - - Iron-sulfur cluster assembly protein
COLPEBDN_01349 2.43e-284 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
COLPEBDN_01350 9.8e-171 tnp3503b - - L - - - Transposase and inactivated derivatives
COLPEBDN_01351 2.75e-211 spoU2 - - J - - - SpoU rRNA Methylase family
COLPEBDN_01353 7.71e-185 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
COLPEBDN_01354 2.19e-77 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
COLPEBDN_01355 1.28e-274 phoH - - T ko:K06217 - ko00000 PhoH-like protein
COLPEBDN_01356 1.5e-134 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
COLPEBDN_01357 0.0 corC - - S - - - CBS domain
COLPEBDN_01358 6.02e-232 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
COLPEBDN_01359 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
COLPEBDN_01360 2.51e-258 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
COLPEBDN_01361 4.73e-62 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
COLPEBDN_01362 0.0 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
COLPEBDN_01363 2.54e-249 - - - S ko:K06889 - ko00000 alpha beta
COLPEBDN_01364 6.37e-139 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
COLPEBDN_01365 2.14e-289 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
COLPEBDN_01366 1.74e-179 - - - S - - - UPF0126 domain
COLPEBDN_01367 1.36e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
COLPEBDN_01368 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
COLPEBDN_01369 0.0 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
COLPEBDN_01370 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
COLPEBDN_01371 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
COLPEBDN_01372 1.11e-103 - - - - - - - -
COLPEBDN_01373 4.8e-114 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
COLPEBDN_01374 2.02e-311 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
COLPEBDN_01375 1.41e-203 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01376 7.41e-254 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
COLPEBDN_01377 1.07e-127 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
COLPEBDN_01378 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
COLPEBDN_01379 6.6e-206 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
COLPEBDN_01380 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
COLPEBDN_01381 1.33e-115 - - - S - - - Domain of unknown function (DUF4186)
COLPEBDN_01382 6.91e-242 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
COLPEBDN_01383 1.83e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
COLPEBDN_01384 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
COLPEBDN_01385 1.68e-225 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
COLPEBDN_01386 3.32e-202 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
COLPEBDN_01387 8.93e-241 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
COLPEBDN_01388 5.35e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COLPEBDN_01389 6.8e-104 ypeA 2.3.1.1 - K ko:K22477 ko00220,ko01210,ko01230,map00220,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.87
COLPEBDN_01390 1.25e-66 - - - L - - - NUDIX domain
COLPEBDN_01391 1.2e-76 - - - K - - - HxlR-like helix-turn-helix
COLPEBDN_01392 9.71e-232 - - - O - - - ADP-ribosylglycohydrolase
COLPEBDN_01393 1.23e-243 - - - S - - - Protein conserved in bacteria
COLPEBDN_01394 5.22e-158 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
COLPEBDN_01395 7.4e-223 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
COLPEBDN_01396 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
COLPEBDN_01397 5e-140 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
COLPEBDN_01398 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
COLPEBDN_01399 2.09e-236 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
COLPEBDN_01400 3.09e-187 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
COLPEBDN_01401 3.78e-249 - - - P - - - Cation efflux family
COLPEBDN_01402 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
COLPEBDN_01403 1.93e-157 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
COLPEBDN_01404 1.57e-127 nnrE - - L - - - Uracil DNA glycosylase superfamily
COLPEBDN_01405 2.31e-230 - - - - - - - -
COLPEBDN_01407 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
COLPEBDN_01408 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
COLPEBDN_01409 1.28e-225 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
COLPEBDN_01410 1.72e-224 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
COLPEBDN_01411 2.67e-224 whiA - - K ko:K09762 - ko00000 May be required for sporulation
COLPEBDN_01412 2.34e-284 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
COLPEBDN_01413 2.06e-194 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
COLPEBDN_01414 2.87e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
COLPEBDN_01415 7.54e-207 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
COLPEBDN_01416 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
COLPEBDN_01417 1.01e-117 - - - K - - - helix_turn_helix ASNC type
COLPEBDN_01418 4.1e-293 - 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K00841,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
COLPEBDN_01419 3.06e-109 - - - S - - - PFAM Pentapeptide repeats (8 copies)
COLPEBDN_01420 9.8e-258 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COLPEBDN_01421 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
COLPEBDN_01422 2.8e-256 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
COLPEBDN_01423 2.49e-279 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
COLPEBDN_01424 2.17e-204 - - - G - - - Fructosamine kinase
COLPEBDN_01425 1.67e-191 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COLPEBDN_01426 4.49e-199 - - - S - - - PAC2 family
COLPEBDN_01432 2.65e-32 - - - - - - - -
COLPEBDN_01433 5.2e-123 - 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
COLPEBDN_01435 3.74e-127 - - - S - - - ATPases associated with a variety of cellular activities
COLPEBDN_01436 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
COLPEBDN_01437 8.83e-151 pgsA1 2.7.8.11, 2.7.8.5 - I ko:K00995,ko:K00999 ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070 ko00000,ko00001,ko01000 CDP-alcohol phosphatidyltransferase
COLPEBDN_01438 4.4e-247 htrB 2.3.1.265 - M ko:K22311 - ko00000,ko01000 Bacterial lipid A biosynthesis acyltransferase
COLPEBDN_01439 1.34e-240 pimA 2.4.1.345 GT4 M ko:K08256 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
COLPEBDN_01440 6.09e-175 yebC - - K - - - transcriptional regulatory protein
COLPEBDN_01441 6.75e-132 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
COLPEBDN_01442 5.91e-141 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
COLPEBDN_01443 1.2e-260 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
COLPEBDN_01444 1.9e-72 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
COLPEBDN_01445 2.2e-133 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COLPEBDN_01446 5.72e-283 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
COLPEBDN_01447 1.85e-212 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
COLPEBDN_01448 0.0 - - - - - - - -
COLPEBDN_01449 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
COLPEBDN_01450 5.52e-37 - - - - - - - -
COLPEBDN_01451 3.45e-221 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
COLPEBDN_01452 7.04e-186 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
COLPEBDN_01453 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
COLPEBDN_01455 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
COLPEBDN_01456 0.0 - - - K - - - WYL domain
COLPEBDN_01457 2.35e-67 - - - - - - - -
COLPEBDN_01458 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
COLPEBDN_01459 5.49e-82 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
COLPEBDN_01460 2.61e-179 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
COLPEBDN_01461 5e-88 - - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COLPEBDN_01462 3.58e-85 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
COLPEBDN_01463 5.12e-91 - - - - - - - -
COLPEBDN_01464 2.48e-170 merR2 - - K - - - helix_turn_helix, mercury resistance
COLPEBDN_01465 2.66e-97 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
COLPEBDN_01466 1.81e-197 - - - S - - - Bacterial protein of unknown function (DUF881)
COLPEBDN_01467 1.09e-63 sbp - - S - - - Protein of unknown function (DUF1290)
COLPEBDN_01468 2.38e-225 - - - S - - - Bacterial protein of unknown function (DUF881)
COLPEBDN_01469 4.93e-141 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
COLPEBDN_01470 5.79e-201 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
COLPEBDN_01471 3.18e-55 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
COLPEBDN_01472 2.68e-157 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
COLPEBDN_01473 4.78e-235 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COLPEBDN_01474 3.55e-206 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
COLPEBDN_01475 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
COLPEBDN_01476 0.00074 - - - - - - - -
COLPEBDN_01477 3.13e-11 - - - - - - - -
COLPEBDN_01478 4.39e-148 - - - L - - - Uracil DNA glycosylase superfamily
COLPEBDN_01479 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
COLPEBDN_01480 6.65e-100 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
COLPEBDN_01481 2.11e-178 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
COLPEBDN_01482 4.44e-173 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
COLPEBDN_01483 3.54e-149 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01484 7.65e-136 - - - K - - - WHG domain
COLPEBDN_01485 3.81e-294 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
COLPEBDN_01486 5.59e-226 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
COLPEBDN_01487 1.16e-119 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
COLPEBDN_01488 5.41e-172 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
COLPEBDN_01489 2.5e-177 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
COLPEBDN_01490 1.03e-208 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
COLPEBDN_01491 5.55e-111 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
COLPEBDN_01492 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
COLPEBDN_01494 2.97e-266 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
COLPEBDN_01495 1.2e-305 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
COLPEBDN_01496 0.0 - - - G - - - ABC transporter substrate-binding protein
COLPEBDN_01497 1.13e-137 - - - M - - - Peptidase family M23
COLPEBDN_01498 1.16e-81 - - - - - - - -
COLPEBDN_01500 1.79e-117 - - - - - - - -
COLPEBDN_01502 7.97e-251 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
COLPEBDN_01503 3.49e-118 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
COLPEBDN_01504 7.23e-202 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
COLPEBDN_01505 1.84e-146 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
COLPEBDN_01506 2.44e-239 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
COLPEBDN_01507 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
COLPEBDN_01508 2.36e-171 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
COLPEBDN_01509 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
COLPEBDN_01510 5.23e-213 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
COLPEBDN_01511 5.76e-217 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
COLPEBDN_01512 1.72e-206 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
COLPEBDN_01513 9.97e-94 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
COLPEBDN_01516 3.21e-134 - - - - - - - -
COLPEBDN_01517 6.21e-159 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
COLPEBDN_01518 4.35e-94 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
COLPEBDN_01519 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
COLPEBDN_01521 2.27e-246 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
COLPEBDN_01522 1.06e-171 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COLPEBDN_01523 3.59e-148 - - - - - - - -
COLPEBDN_01524 4.6e-307 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
COLPEBDN_01525 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
COLPEBDN_01526 3.85e-166 - - - S - - - Haloacid dehalogenase-like hydrolase
COLPEBDN_01527 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
COLPEBDN_01528 8.73e-236 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
COLPEBDN_01529 9.59e-152 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
COLPEBDN_01530 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
COLPEBDN_01531 8.69e-185 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
COLPEBDN_01532 4.09e-248 - - - G - - - Haloacid dehalogenase-like hydrolase
COLPEBDN_01533 2.75e-261 - - - L - - - Tetratricopeptide repeat
COLPEBDN_01534 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
COLPEBDN_01535 3.62e-116 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
COLPEBDN_01536 2.58e-183 butA 1.1.1.100, 1.1.1.304, 1.1.1.76 - IQ ko:K00059,ko:K03366 ko00061,ko00333,ko00650,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00650,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
COLPEBDN_01537 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
COLPEBDN_01538 8.47e-304 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
COLPEBDN_01539 1.23e-119 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
COLPEBDN_01540 5.7e-235 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
COLPEBDN_01541 1.31e-305 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
COLPEBDN_01542 5.02e-228 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
COLPEBDN_01543 7.16e-278 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
COLPEBDN_01544 1.64e-260 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
COLPEBDN_01545 5.69e-190 - - - - - - - -
COLPEBDN_01546 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
COLPEBDN_01547 3.65e-251 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
COLPEBDN_01548 9.87e-217 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
COLPEBDN_01549 1.8e-18 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
COLPEBDN_01550 2.42e-288 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
COLPEBDN_01551 3.03e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_01552 0.0 ykoD - - P ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01553 2.66e-139 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
COLPEBDN_01554 1.05e-287 ytrE - - V ko:K02003,ko:K10038 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 lipoprotein transporter activity
COLPEBDN_01555 6.74e-209 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
COLPEBDN_01556 1.03e-55 - - - - - - - -
COLPEBDN_01557 7.53e-272 - - - T - - - Histidine kinase
COLPEBDN_01558 0.0 argE - - E - - - Peptidase dimerisation domain
COLPEBDN_01559 6.92e-134 - - - S - - - Protein of unknown function (DUF3043)
COLPEBDN_01560 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
COLPEBDN_01561 1.07e-188 - - - S - - - Domain of unknown function (DUF4191)
COLPEBDN_01562 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
COLPEBDN_01563 3.49e-143 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
COLPEBDN_01564 5.3e-263 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
COLPEBDN_01565 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
COLPEBDN_01566 0.0 - - - S - - - Tetratricopeptide repeat
COLPEBDN_01567 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
COLPEBDN_01568 7.71e-193 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
COLPEBDN_01569 2.37e-277 - - - E - - - Aminotransferase class I and II
COLPEBDN_01570 1.93e-172 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
COLPEBDN_01571 2.94e-85 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
COLPEBDN_01572 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
COLPEBDN_01573 7.3e-210 - - - S - - - Aldo/keto reductase family
COLPEBDN_01574 1.9e-62 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
COLPEBDN_01575 7.88e-182 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
COLPEBDN_01576 1.17e-93 yccF - - S - - - Inner membrane component domain
COLPEBDN_01577 1.42e-85 - - - S - - - Zincin-like metallopeptidase
COLPEBDN_01578 2.23e-184 - - - E - - - Psort location Cytoplasmic, score 8.87
COLPEBDN_01579 0.0 - - - - - - - -
COLPEBDN_01581 8.63e-255 - - - L - - - Transposase, Mutator family
COLPEBDN_01582 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
COLPEBDN_01583 0.0 - - - EGP - - - Major Facilitator Superfamily
COLPEBDN_01584 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
COLPEBDN_01585 0.0 - - - L - - - DEAD DEAH box helicase
COLPEBDN_01586 1.25e-239 - - - S - - - Polyphosphate kinase 2 (PPK2)
COLPEBDN_01587 1.1e-256 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_01588 2.23e-142 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
COLPEBDN_01589 1.51e-198 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
COLPEBDN_01590 1.1e-182 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
COLPEBDN_01591 1.4e-189 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
COLPEBDN_01592 5.33e-294 - - - S - - - Domain of Unknown Function (DUF349)
COLPEBDN_01593 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
COLPEBDN_01594 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
COLPEBDN_01595 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
COLPEBDN_01596 1.7e-234 uspA - - T - - - Belongs to the universal stress protein A family
COLPEBDN_01597 6.14e-178 - - - - - - - -
COLPEBDN_01598 4.88e-266 - - - S - - - Protein of unknown function (DUF3027)
COLPEBDN_01599 1.15e-103 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
COLPEBDN_01600 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
COLPEBDN_01601 4.23e-171 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
COLPEBDN_01602 1.78e-202 - - - - - - - -
COLPEBDN_01603 2.56e-56 - - - S - - - Proteins of 100 residues with WXG

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)